Gene BamMC406_2607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2607 
Symbol 
ID6176138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand- 
Start bp2894949 
End bp2895632 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content73% 
IMG OID641682383 
ProductXRE family transcriptional regulator 
Protein accessionYP_001809300 
Protein GI172061648 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCAT CCCTGGCGCT GGTGCGCGAC GTGTCTTCCT TCGAGTCCGG CGACGCCGCC 
GGCGCGCGGG CGGCCGCGTC GCTCGACGTC CTCGAGCAGG TCGTCGGCGT GAATCTCGCG 
CGCTTGCGCG CCGAGCGGCA GTTGTCGCTC GATGCGCTTG CGCGTCTGTC CGGCGTATCG 
CGCGCGATGC TCGCGCAGAT CGAATCCGCA CGCAGCGTGC CGTCGATCAA GGTGCTCTGC 
AAGATCGCCG CGGCGCTGAA GGTGTCGGTC GCCGCGTTCC TGCGCCGCCA CGCGGTGAAC 
GGCTTCGAGC ACCTGGCGGC GGAGCGCGCG GCGCGCGTCG TGAGCTCGAG CGGCCGTTTC 
TCGGCGCGCG CGCTGTATCC GGAGGGCGAA CCGGCCGCGG CCGAATTCCA CGAGCTGCGG 
ATCGCGCCGC TGCACACGGA GCCCGGCACG CGGCGCGCGC CCGGCACGAC GGTCAACCTG 
GTCGTGAGCG AGGGCACGCT CGAAGTCAGC GTGCACGATC GCCGCCAGTT GCTCGCGACC 
GGCGACGCGA TCGTGTTCGA CGCCGACCAG CCGTACAGCC TGCGCAATCC GGGCGACACC 
GAGGCGCGCG CGTTCCGCGT GACGGTGAGC CCCGAAGTGC CGCCGCGCTG GCTCGTGCCC 
GACGCCGCGC ATGCGGCGGG CTGA
 
Protein sequence
MSSSLALVRD VSSFESGDAA GARAAASLDV LEQVVGVNLA RLRAERQLSL DALARLSGVS 
RAMLAQIESA RSVPSIKVLC KIAAALKVSV AAFLRRHAVN GFEHLAAERA ARVVSSSGRF 
SARALYPEGE PAAAEFHELR IAPLHTEPGT RRAPGTTVNL VVSEGTLEVS VHDRRQLLAT 
GDAIVFDADQ PYSLRNPGDT EARAFRVTVS PEVPPRWLVP DAAHAAG