Gene BamMC406_2515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2515 
Symbol 
ID6178735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand+ 
Start bp2793688 
End bp2794344 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content68% 
IMG OID641682291 
Productferric uptake regulator family protein 
Protein accessionYP_001809209 
Protein GI172061557 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.432858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCT GCGGCACGGC GCAATGCAGC GTCGGCCCGC GACCCGCGTC CGGCAAGGCG 
CGGCGCACCG GGTGCGGCGC GGCTGAAACG ACGATGAAGG GGACGCAACG TATCCGGGGG 
ACGGAATTCG GGCTGCACGC CAGGGAGATA CGTTATATCA TCGCCATACT TCGTTTTTCA 
TGCCTGCTTC ACGCCATGGC CACCTCATCG CCCATCGACG CCCGTCTGTC CCGGGCCGAC 
GCATTCGCCG CCGAGCACGG GCTCGCGTGG ACGCCGCTGC GCCGCCAGGT CTACGAACGC 
GTGCTGGCCG CGCAGCGCCC GATCGGCGCG TACGATCTGC TCGCCGAGCT CGAGCCGCAG 
CGCGGCCGCG TGCCGCCCAC GACCGTCTAT CGCGCGCTGG ATTTCCTCGT CGAGCACGGC 
TTCATCCACC GGATCGAATC GAAGAACGCG TTCTTCGCGT GCTGCGAGAT CGGCGTGCCG 
CACGAAGGCC AGTTCCTGAT CTGCGATTCG TGCGGCGAGA CCGTCGAGAT CCCGGGCAGC 
GACCTCGCGA AGCAGCTGTC CGCGAGCGCG CCCGCGCACG GGTTCGAAGT CCACCACCAG 
GTCGTCGAGC TGAACGGCCT GTGCGGGCAC TGCAAGGGCA AGCCCGCGCA TCGCTGA
 
Protein sequence
MMRCGTAQCS VGPRPASGKA RRTGCGAAET TMKGTQRIRG TEFGLHAREI RYIIAILRFS 
CLLHAMATSS PIDARLSRAD AFAAEHGLAW TPLRRQVYER VLAAQRPIGA YDLLAELEPQ 
RGRVPPTTVY RALDFLVEHG FIHRIESKNA FFACCEIGVP HEGQFLICDS CGETVEIPGS 
DLAKQLSASA PAHGFEVHHQ VVELNGLCGH CKGKPAHR