| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2498 |
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| Symbol | |
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| ID | 6178500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2773101 |
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| End bp | 2774042 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641682274 |
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| Product | tryptophan 2,3-dioxygenase |
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| Protein accession | YP_001809192 |
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| Protein GI | 172061540 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3483] Tryptophan 2,3-dioxygenase (vermilion) |
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| TIGRFAM ID | [TIGR03036] tryptophan 2,3-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.817763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATTCTG GTCCTATGAA GCCACCCGGC GACAATGCGC CGGCGGGCTG CCCGTTCTCG
GGCGCACGCG CGGCCCAACC CGCTCATGAA GCGCCGCACG TGCCGGGCGA CGCGGCAGGC
GAAACCGGCT GGCACGACGC GCAGCTCGAT TTCTCGAAGT CGATGAGCTA CGGCGACTAT
CTGTCGCTGA ATTCGATCCT CGACGCGCAG CATCCGCTGT CGCCCGATCA CAACGAGATG
CTGTTCATCA TCCAGCATCA GACGAGCGAG CTGTGGATGA AGCTCGCGCT GTTCGAGCTG
CGCGGCGCGC TCGACGCGGT GCGCGGCGAC GCGCTGCCGC CCGCGTTCAA GATGCTCGCG
CGCGTGTCGC GGATCCTCGA GCAGCTCGTG CAGGCGTGGA ACGTGCTGTC GACGATGACG
CCGTCCGAGT ATTCGGCGAT GCGGCCGTAT CTCGGCCAGT CGTCCGGCTT CCAGTCGTAC
CAGTACCGGC AGCTCGAATT CCTGCTCGGC AACAAGAACG TGCAGATGCT GCAGCCGCAT
GCGCACCGGC CCGACATCCT CGAGCAGGTG CGCGCGACGC TCGAGGCGCC GTCGTTCTAC
GACGAGGTCG TGCGCCTGCT CGCGCGGCGC GGTTTCCCGA TCGCGTCCGA ACGGCTCGAG
CGCGACTGGA CGCAGCCGAT GCGTCACGAC GAAACGGTCG AGGCCGCGTG GCTCGAGGTC
TACCGTCACC CGCAGCAGCA CTGGGAGCTG TACGAGATGG CCGAGGAACT CGTCGATCTC
GAGGATGCGT TCCGCCAGTG GCGCTTCCGT CACGTGACGA CCGTCGAGCG CATCATCGGC
TTCAAGCAGG GCACCGGCGG CACGAGCGGT GCGCCGTATC TGCGCAAGAT GCTCGACGTC
GTGCTGTTCC CCGAGCTCTG GCACGTGCGC ACCACGCTGT AA
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| Protein sequence | MNSGPMKPPG DNAPAGCPFS GARAAQPAHE APHVPGDAAG ETGWHDAQLD FSKSMSYGDY
LSLNSILDAQ HPLSPDHNEM LFIIQHQTSE LWMKLALFEL RGALDAVRGD ALPPAFKMLA
RVSRILEQLV QAWNVLSTMT PSEYSAMRPY LGQSSGFQSY QYRQLEFLLG NKNVQMLQPH
AHRPDILEQV RATLEAPSFY DEVVRLLARR GFPIASERLE RDWTQPMRHD ETVEAAWLEV
YRHPQQHWEL YEMAEELVDL EDAFRQWRFR HVTTVERIIG FKQGTGGTSG APYLRKMLDV
VLFPELWHVR TTL
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