Gene BamMC406_2401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2401 
Symbol 
ID6177015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2668842 
End bp2669732 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content72% 
IMG OID641682177 
Productalpha/beta hydrolase fold 
Protein accessionYP_001809095 
Protein GI172061443 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.174611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTT ATCGATTCGC GACGACCGCG TCGCTCGAAC TCGCCTATCT CGAATGGAAT 
CCGCGCGGCG AACGCGTGGC CGTGTTGATG CACGGCTGGC CGGACAGCCC GGTCGGCTGG
GAGACGGTCG CGCAGGCGCT GGCTGTCCGC GGCTACCGCG TGCTCGCGCC CGCGCTGCGC
GGCTTCGCGC CGACCCGTTT TCGCGATACG ACGGTGCCGC GCAGCGGCCA GCTCGCGGCG
CTCGGGCGCG ACCTGCTGGA ATTCGTCGAC GTGCTCGGCC TTAAGCGGCC CGTGCTGGTC
GGACACGACT GGGGCGCCCG CGCGGTCGCG AACGCGTGCG GGCTGCGCGA CGGCGTCGCG
TCGCACCTGG TGATGCTGTC GGTCGGCTAC GGCACCAACG ATCCCGCGCA GCCGCTGTCG
CTGCAGCAGG CGCGCAATTA CTGGTATCAC TGGTTCATGG CGACGCCGCG CGGCGAGCAG
GCGTTGCGCG ACGACCGCCG CGCGTTCGCA CGCCTGATGT GGGATACGTG GTCGCCGCCG
GGCTGGTATC GCGATGTGGA ATTCGACGCG GCTGGCACGG CGTTCGACGG GCCCGACTGG
ATCGACGTCG TGCTGCATTC GTACCGGCAG CGGTGGGGCT TCGCGCCCGG CACGCCGGCC
TATGCGGACG ACGACGCGCG GCTGAACCCG GCGCCGCGGC TGTCGGTGCC GACGCTCGTG
CTGCATGGCG GCGCGGATGC GTGCAATCAC CCGGACGGCT CGGCCGGGCG CGAGCGGTTC
TTCACCGGGC GCTACGCGCG ACAGTTGCTG GACGGCGTGG GGCACTTTCC GCAGCGGGAG
GCGCCGGCCG CGGTCGCGCA GGCAATCCTC CGGTTCTGCG AGCGAGACTG A
 
Protein sequence
MTAYRFATTA SLELAYLEWN PRGERVAVLM HGWPDSPVGW ETVAQALAVR GYRVLAPALR 
GFAPTRFRDT TVPRSGQLAA LGRDLLEFVD VLGLKRPVLV GHDWGARAVA NACGLRDGVA
SHLVMLSVGY GTNDPAQPLS LQQARNYWYH WFMATPRGEQ ALRDDRRAFA RLMWDTWSPP
GWYRDVEFDA AGTAFDGPDW IDVVLHSYRQ RWGFAPGTPA YADDDARLNP APRLSVPTLV
LHGGADACNH PDGSAGRERF FTGRYARQLL DGVGHFPQRE APAAVAQAIL RFCERD