Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2376 |
Symbol | |
ID | 6176847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2644936 |
End bp | 2645676 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641682151 |
Product | hypothetical protein |
Protein accession | YP_001809070 |
Protein GI | 172061418 |
COG category | [S] Function unknown |
COG ID | [COG3471] Predicted periplasmic/secreted protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAAGA AAACCGCACT CGCGCTGTCG CTCGCCCTCG CCGCCGCCGT GCCCGTCGCG CTGACGCTCG CGTCGCCGGC CGCGCATGCG CAAACGGCGA ACCCGCACTT TCCGGAGCCG GCGGGCGTGC TGTCGCTGTC GTCGCAAGCC AGCGCGGACG TGCCGCAGGA CATCATCCAC ATCACGCTGT TCTACGAACA GCAGGCGAAG GACCCGGGCA GCCTGACGTC CGCGCTGAAC CAGCGCGCCG ATGCCGCGCT CGCGCAGGCG AAGGGCGTAT CGGGCGTCAC GGCGCACACC GGTGCGTTCT CCGTGTATCC GAGCACCGAT CGCGACGGCA AGATCTCCGC ATGGCGCGGC CGTACCGAAG TCGTGCTCGA ATCGCGCGAT TTCGCGGCGG CATCGAAGCT CGCGGGCCAG TTGTCGAACC AGATGCAGAT CGCGAACGTC GAGTTCTCGC TGTCGCCCGA AGCGCAGCGC GCGGCCGAGC AGAAGCTCAC GACCGAAGCG ATCAAGTCGT TCCGCACTCG CGCGGACGAA GCCGCGAAGG CCTTCGGCTA CGGCAGCTAC TCGATCCGCG ACGTGAACGT CGGCGGCGGC CGCAGCGTGC AGCCGTATCC GCGCATGATG GCGATGGCCG CGGCGCCGAT GGACAACGCA AAGATGAGCG CACCGATCGC GGTCGAAGGC GGCAAGGCGA CCGTGTCGGT CACGGTCAAC GGCTCGGTGC AGATGAAGTA A
|
Protein sequence | MTKKTALALS LALAAAVPVA LTLASPAAHA QTANPHFPEP AGVLSLSSQA SADVPQDIIH ITLFYEQQAK DPGSLTSALN QRADAALAQA KGVSGVTAHT GAFSVYPSTD RDGKISAWRG RTEVVLESRD FAAASKLAGQ LSNQMQIANV EFSLSPEAQR AAEQKLTTEA IKSFRTRADE AAKAFGYGSY SIRDVNVGGG RSVQPYPRMM AMAAAPMDNA KMSAPIAVEG GKATVSVTVN GSVQMK
|
| |