| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2294 |
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| Symbol | |
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| ID | 6177191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2558508 |
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| End bp | 2559248 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641682069 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001808989 |
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| Protein GI | 172061337 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGAC TTCAGGGCAA GCGCGCACTC GTCACGGGCG GCAGTCGCGG CATCGGCGCG
GCCATTGCGA AACGGCTGGC GGCCGATGGC GCGGACGTCG CGATCACTTA CGAGAAATCG
GCGGAGCGGG CGCGGGCCGT CGTTGCCGAC ATCGAGGCGC TCGGCCGCCG GGCCGTCGCG
ATCCAGGCCG ACAGCGCCGA TCCGGTGGCC GTGCGCGGCG CGGTCGATCA TGCCGCGCAG
ACGCTCGGCG GCCTCGACAT CCTCGTCAAC AACGCGGGCA TCTTCCGCGC GGCCGCGCTG
GACGACCTCA CGCTCGACGA TATCGACGCG ACGCTGAACG TCAACGTGCG CGCGGTGATC
GTCGCGTCGC AGGCGGCTGC GCGGCATCTC GGGGAGGGCG GGCGCATCGT GTCGACCGGC
AGTTGCCTCG CGACGCGCGT GCCCGACGCG GGGATGAGCC TCTATGCGGC GAGCAAGGCC
GCGCTGATCG GCTGGACGCA GGGGCTCGCG CGCGATCTCG GTGCGCGCGG CATCACGGTC
AATCTCGTGC ATCCGGGGTC GACCGATACG GACATGAATC CGGCCGACGG TGAGCATGCC
GGCGCGCAAC GTTCGCGGAT GGCGATTCCG CAGTACGGCA AGGCGGAGGA CGTCGCGGCA
CTCGTCGCGT TCGTCGTCGG GCCGGAAGGG CGGTCGATTA ACGGTACCGG GTTGACAATC
GATGGCGGTG CGAATGCATA A
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| Protein sequence | MNRLQGKRAL VTGGSRGIGA AIAKRLAADG ADVAITYEKS AERARAVVAD IEALGRRAVA
IQADSADPVA VRGAVDHAAQ TLGGLDILVN NAGIFRAAAL DDLTLDDIDA TLNVNVRAVI
VASQAAARHL GEGGRIVSTG SCLATRVPDA GMSLYAASKA ALIGWTQGLA RDLGARGITV
NLVHPGSTDT DMNPADGEHA GAQRSRMAIP QYGKAEDVAA LVAFVVGPEG RSINGTGLTI
DGGANA
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