Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2181 |
Symbol | |
ID | 6177568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2432562 |
End bp | 2434325 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641681954 |
Product | acetolactate synthase 3 catalytic subunit |
Protein accession | YP_001808876 |
Protein GI | 172061224 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.384106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATGC CCAGCGCGGA ATTCTCCACG TCGGAACCCC TTTCCCCTCC CGATAGCGAC TCCATCGGCG CCACCGTGCT CATGAAGGCA CTGGCCGACG AGAACGTCGA ATTCATCTGG GGCTACCCCG GCGGCTCGGT ACTCTACATC TACGACGAGC TTTACAAGCA GGACAAGATT CAGCACGTGC TGGTGCGCCA CGAACAGGCG GCCGTGCACG CAGCCGATGC GTATGCGCGT TCCACCGGCA ACGTCGGCGT CTGTCTCGTG ACGTCCGGCC CCGGTGTCAC CAATGCGGTG ACCGGCATCG CGACGGCCTA CATGGATTCG ATCCCGATGG TCGTGATCAG CGGCCAGGTG CCGACTGCCG CGATCGGCCA GGACGCATTC CAGGAATGCG ACACCGTCGG CATCACGCGT CCGTGCGTGA AGCACAACTT CCTCGTGAAG GACGTGCGCG ACCTCGCGGA AACCGTCAAG AAGGCGTTCT ACATCGCCCG CACCGGCCGT CCGGGCCCGG TGCTGATCGA CATCCCGAAA GACATCTCCA AGACCCCGTG CCAGTACGAG CCGGTCAAGA GCGTGTCGCT GCGTTCGTAC AACCCCGTCA CGAAAGGTCA TTCGGGCCAG ATCCGCAAGG CCGTGTCGTT GCTGCTGTCG GCGAAGCGTC CGTACATCTA CACGGGCGGC GGCATCATCC TCGCCGACGC GGCGCGCGAA CTGAACCAGT TCGCCGACCT GCTCGGCTAC CCGGTCACGA ACACGCTGAT GGGCCTCGGC GGCTATCGCG CGTCGGACAG GAAATTCCTC GGCATGCTCG GCATGCACGG CACCTACGAA GCGAACATGG CGATGCAGCA CTGTGACGTG CTGATCGCGA TCGGCGCGCG CTTCGACGAC CGCGTGATCG GCGACCCGGC GCACTTCGCG TCGCGTCCGC GCAAGATCAT CCACATCGAC ATCGACCCGT CGTCGATCTC GAAGCGCGTG AAGGTCGACA TCCCGATCGT CGGCGACGTG AAGGAAGTGC TGAAGGAGTT GATCGAGCAG CTGCAGACGG CCGAGCATGG CCCCGATGCC GACGCGCTCG CGCAATGGTG GAAGGACATC GAGGGCTGGC GCTCGAAGGA CTGCCTGAAG TTCGACCGCG AAAGCGAGAT CATCAAGCCG CAGTACGTGG TCGAGAAGGC GTGGGAGCTG ACGGACGGCA ACGCGTTCGT GTGCTCGGAC GTCGGCCAGC ACCAGATGTG GGCCGCGCAG TTCTACCGTT TCAACAAGCC GCGTCGCTGG ATCAACTCCG GCGGCCTCGG CACGATGGGC TTCGGCCTGC CGGCAGCGAT GGGCGTCAAG ATGGCGCACC CGGACGACGA CGTGCTGTGC ATCACGGGCG AAGGCTCGAT CCAGATGTGC ATCCAGGAAC TGTCGACCTG CCTGCAGTAC GACACGCCCG TGAAGATCAT TTCGCTGAAC AACCGCTATC TCGGCATGGT CCGCCAGTGG CAGCAGATCG AATACAGCAA GCGCTATTCG CATTCGTACA TGGATGCGCT GCCCGATTTC GTGAAGCTCG CCGAAGCGTA CGGCCATGTC GGCATGCGGA TCGAAAAGAC CTCGGATGTG GAGCCGGCGC TGAAGGAAGC GCTGCGCCTG AAGGACCGCA CCGTGTTTCT CGATTTCCAG ACCGATCCGA CCGAAAACGT CTGGCCGATG GTACAGGCCG GCAAGGGCAT CACCGAGATG CTGCTCGGAT CGGAAGATCT GTAA
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Protein sequence | MNMPSAEFST SEPLSPPDSD SIGATVLMKA LADENVEFIW GYPGGSVLYI YDELYKQDKI QHVLVRHEQA AVHAADAYAR STGNVGVCLV TSGPGVTNAV TGIATAYMDS IPMVVISGQV PTAAIGQDAF QECDTVGITR PCVKHNFLVK DVRDLAETVK KAFYIARTGR PGPVLIDIPK DISKTPCQYE PVKSVSLRSY NPVTKGHSGQ IRKAVSLLLS AKRPYIYTGG GIILADAARE LNQFADLLGY PVTNTLMGLG GYRASDRKFL GMLGMHGTYE ANMAMQHCDV LIAIGARFDD RVIGDPAHFA SRPRKIIHID IDPSSISKRV KVDIPIVGDV KEVLKELIEQ LQTAEHGPDA DALAQWWKDI EGWRSKDCLK FDRESEIIKP QYVVEKAWEL TDGNAFVCSD VGQHQMWAAQ FYRFNKPRRW INSGGLGTMG FGLPAAMGVK MAHPDDDVLC ITGEGSIQMC IQELSTCLQY DTPVKIISLN NRYLGMVRQW QQIEYSKRYS HSYMDALPDF VKLAEAYGHV GMRIEKTSDV EPALKEALRL KDRTVFLDFQ TDPTENVWPM VQAGKGITEM LLGSEDL
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