| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2028 |
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| Symbol | lysS |
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| ID | 6176170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2260560 |
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| End bp | 2262086 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641681794 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001808725 |
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| Protein GI | 172061073 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC CGACCCAAAC GCAGCCCGCC GTCGCGGCGG ACGAAAACCA GATCATCGCC
GAGCGCCGCG AGAAGCTGCG CGCATTGCGC GAGCAAGGCG TCGCCTATCC GAACGATTTC
CGGCCGACGC ATCACGCCGC CGATCTCCAG GCCACCTTCG CCGACTCGGA CAAGGCCGCG
CTCGAAGCGA ACCCGGTCGA GGTGTCGGTC GCCGGCCGCA TGATGCTCAA GCGCGTGATG
GGCAAGGCGA GCTTCGCGAC GGTGCAGGAC GGTTCGGGCC AGATCCAGTT CTTCGTGACG
CCGAACGACG TCGGCGCGGA AACCTACGAC GCATTCAAGA AGTGGGATCT CGGCGATATC
GTCGCCGCCC GCGGCGTGCT GTTCCGCACC AACAAGGGCG AGCTGTCGGT CCAGTGCAAG
GAACTGCGCC TGCTGTCGAA GGCGCTGCGC CCGCTGCCGG ACAAGTTCCA CGGCCTCGCC
GACCAGGAAA TGCGCTATCG CCAGCGCTAC GTCGACCTGA TCGTCACGCC GGAAACGCGC
GACACGTTCC GCGCGCGCAC CCGGACCATC GCGTCGATCC GCAAGTTCAT GGACAACGCC
GACTTCATGG AAGTCGAAAC GCCGATGCTG CACCCGATCC CGGGCGGCGC CGCGGCCAAG
CCGTTCGTCA CGCATCACAA CGCGCTCGAC ATGCAGATGT TCCTGCGCAT CGCGCCGGAG
CTGTATCTCA AGCGCCTGAT CGTCGGCGGC TTCGAGCGCG TGTTCGAGAT CAACCGCAAC
TTCCGGAATG AAGGCGTGTC GCCGCGCCAC AACCCGGAAT TCACGATGAT GGAGTTCTAC
GCCGCGTACA CCGATTACCG CTGGCTGATG GACTTCACCG AGCAGTTGAT CCGCCAGGCG
GCGATCGATG CGCTCGGCAC CGCGACGATC CAGTACCAGG GCCGCGAACT CGACCTCGCA
AAGCCGTTCC ACCGCCTGAC GATCACGCAG GCGATCCAGA AGTACGCGCC GCAATACACC
GATGGCCAGC TGTCGGACGA CGCATTCCTG CGTACCGAAC TGAAGCGCTT CGGCGTCGAC
GTGTCGCAGC CGGCCTTCCT GAACGCCGGT ATCGGCGCGC TGCAGCTCGC GCTGTTCGAG
GAAACCGCCG AATCGCAGCT GTGGGAGCCG ACCTACATCA TCGACTACCC GGTCGAAGTG
TCGCCGCTCG CACGCGCGTC GGATACGACG CCGGGCATCA CCGAGCGTTT CGAGCTGTTC
ATGACGGGCC GCGAGATCGC GAACGGCTTC TCGGAGCTGA ACGATCCGGA AGATCAGGCC
GCGCGCTTCA AGAAGCAGGT CGAGCAGAAG GATGCCGGCG ACGAGGAAGC GATGTTCTTC
GACGCCGACT ACATCCGCGC GCTCGAACAC GGGATGCCGC CGACGGGCGG CTGCGGGATC
GGTATCGACC GTCTCGTGAT GCTGCTGACC GACAGCCCCA CGATCCGCGA CGTGCTGCTG
TTCCCGCACC TGCGCCGCGA AGACTGA
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| Protein sequence | MTEPTQTQPA VAADENQIIA ERREKLRALR EQGVAYPNDF RPTHHAADLQ ATFADSDKAA
LEANPVEVSV AGRMMLKRVM GKASFATVQD GSGQIQFFVT PNDVGAETYD AFKKWDLGDI
VAARGVLFRT NKGELSVQCK ELRLLSKALR PLPDKFHGLA DQEMRYRQRY VDLIVTPETR
DTFRARTRTI ASIRKFMDNA DFMEVETPML HPIPGGAAAK PFVTHHNALD MQMFLRIAPE
LYLKRLIVGG FERVFEINRN FRNEGVSPRH NPEFTMMEFY AAYTDYRWLM DFTEQLIRQA
AIDALGTATI QYQGRELDLA KPFHRLTITQ AIQKYAPQYT DGQLSDDAFL RTELKRFGVD
VSQPAFLNAG IGALQLALFE ETAESQLWEP TYIIDYPVEV SPLARASDTT PGITERFELF
MTGREIANGF SELNDPEDQA ARFKKQVEQK DAGDEEAMFF DADYIRALEH GMPPTGGCGI
GIDRLVMLLT DSPTIRDVLL FPHLRRED
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