| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2004 |
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| Symbol | |
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| ID | 6178867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2234884 |
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| End bp | 2236026 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641681770 |
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| Product | NlpB/DapX family lipoprotein |
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| Protein accession | YP_001808701 |
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| Protein GI | 172061049 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3317] Uncharacterized lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.547215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000202263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAACGTT TCGCCTTTTC ATCTCGCGCC ATCCAGGTTT CGGTGGTGGC GCTGGCGCTG
GGCGCGCTCG CCGGCTGCGA TACGCTGAAC GACTATCTGG CTCCTGACCG CGTCAACTAC
AAGAACACGG GTTCGGCGCC GCCGCTCGCC GTGCCGAGCG ACCTGAAGCC GGTGCCGACG
ACTCAGCAGT TCGTCGCGCC GCCGAGCAAC GCAGGTCTTG GCACGCTGCC GCCGCGGGCG
ACGACGGCCG CCGGCAACGC GACCGACGGC GTCCCGAGCG CGCAGGATCC GCTCGGCATG
CATATCGAGC GCGACGGCGA CCGCCGCTGG CTCGTCGTCG ACGGGCGCAC GCCCGAGCAG
CTGTGGCCGA TCCTGAAGGA ATTCTGGCAG GAGAACGGCT TCTCGCTGAA GACGGACGCA
CCGTCGACCG GCATCATGGC CACCGACTGG GCCGAGAACC GCGCGAACAT TCCCGACGAC
TGGTTCCGCC GCACGATCGG CAAGGTCATC GATTTCGCAT ACTCGTCCGG CACGCGCGAC
CGTTTCCGTA CGCTCGTGAA CCGCACGTCG AACGGCAACA CCGACATCTC GATCACGCAC
AGCGCGATGG AGGAAATGAT GGTCGGTCCG CAGGGCGGCA CGTCGTCGCG CTGGGAAGAG
CGTCCGCGCA ACCCGGTGCT CGAGGCCGTG TTCCTGTCGA AGCTGATGCA GAAGTTCGGC
CTGAGCGACG CGCAGGCGAA GCAGCTGCTG ACGGACGCGC GTCCGGCGAC GGCGCCGGCG
CAGGTCGGCG ACGCGAGCAG CGGCGCCGCG ACGCTGCAGC TGGCTGAATC GTTCGACCGC
GCATGGCTGC GCGTCGGTCT TGCGCTCGAC CGTACCAATT TCGCGGTCGA CAATCGCGAT
CGCGAGAAGG GCCTGTACAC GGTCCGCTAC GCGAACACGA TGGAAGAGCT CAAGCGCGAC
GGGCTGTTCG GCAAGCTGTT CTACGGCGGC CCGGCGGCGG CCAAGCCCGG CAAGGAATAC
CTCGTCAACG TGCGCGCCCA GGGCAGCGGC ACGCAGGTCG CAGTGGTCGA CGCCAGCGGC
AAGGTCGACA ACTCGTCGGA CGCGCAGCGG ATCATTTCGC TGCTGCACGC CGAACTGAAC
TGA
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| Protein sequence | MKRFAFSSRA IQVSVVALAL GALAGCDTLN DYLAPDRVNY KNTGSAPPLA VPSDLKPVPT
TQQFVAPPSN AGLGTLPPRA TTAAGNATDG VPSAQDPLGM HIERDGDRRW LVVDGRTPEQ
LWPILKEFWQ ENGFSLKTDA PSTGIMATDW AENRANIPDD WFRRTIGKVI DFAYSSGTRD
RFRTLVNRTS NGNTDISITH SAMEEMMVGP QGGTSSRWEE RPRNPVLEAV FLSKLMQKFG
LSDAQAKQLL TDARPATAPA QVGDASSGAA TLQLAESFDR AWLRVGLALD RTNFAVDNRD
REKGLYTVRY ANTMEELKRD GLFGKLFYGG PAAAKPGKEY LVNVRAQGSG TQVAVVDASG
KVDNSSDAQR IISLLHAELN
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