Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1646 |
Symbol | |
ID | 6176955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1842557 |
End bp | 1843021 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641681407 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001808349 |
Protein GI | 172060697 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.81693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCCAC CTCGCCTCGA CCAACTCGAC GACCTCGACC GGCAACTCGT TGCGCTGCTG CAAGCCGATG CGCGCGCAAG CGTTGCCGAT CTCGCGCGGC AGCTCGACGT CGCCCGCACG ACGGTCGTCG CGCGCATCGC GCGGCTCGAG CGCACGAACG TGATCGCCGG GTACAGCGTG CGGCTCGGGC AGGATGTGCT CGATGCGAGC ATTTATGCGT ATGTCGGCAT CATCCTCACG CCGAAGTTCG GCAAGGACGT GTTGCGCAGG CTCGACCGGA TGCCCGAAGT GCAGCTGCTG TGCGCGGTGA GCGGCGAATA CGACTATGTC GCGTGGCTGC GTGCCGATTC GCCGGAGCGG CTCAACGACC TGCTCGACCA GATCGGCACG CTCGAGGGCG TCGAGCGCAC GACGACGTCG ATCATTCTGT CGCGCAAGAT CGATCGCGGC ACGATCGGCG GATGA
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Protein sequence | MRPPRLDQLD DLDRQLVALL QADARASVAD LARQLDVART TVVARIARLE RTNVIAGYSV RLGQDVLDAS IYAYVGIILT PKFGKDVLRR LDRMPEVQLL CAVSGEYDYV AWLRADSPER LNDLLDQIGT LEGVERTTTS IILSRKIDRG TIGG
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