Gene BamMC406_1646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1646 
Symbol 
ID6176955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1842557 
End bp1843021 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content66% 
IMG OID641681407 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001808349 
Protein GI172060697 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.81693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCAC CTCGCCTCGA CCAACTCGAC GACCTCGACC GGCAACTCGT TGCGCTGCTG 
CAAGCCGATG CGCGCGCAAG CGTTGCCGAT CTCGCGCGGC AGCTCGACGT CGCCCGCACG
ACGGTCGTCG CGCGCATCGC GCGGCTCGAG CGCACGAACG TGATCGCCGG GTACAGCGTG
CGGCTCGGGC AGGATGTGCT CGATGCGAGC ATTTATGCGT ATGTCGGCAT CATCCTCACG
CCGAAGTTCG GCAAGGACGT GTTGCGCAGG CTCGACCGGA TGCCCGAAGT GCAGCTGCTG
TGCGCGGTGA GCGGCGAATA CGACTATGTC GCGTGGCTGC GTGCCGATTC GCCGGAGCGG
CTCAACGACC TGCTCGACCA GATCGGCACG CTCGAGGGCG TCGAGCGCAC GACGACGTCG
ATCATTCTGT CGCGCAAGAT CGATCGCGGC ACGATCGGCG GATGA
 
Protein sequence
MRPPRLDQLD DLDRQLVALL QADARASVAD LARQLDVART TVVARIARLE RTNVIAGYSV 
RLGQDVLDAS IYAYVGIILT PKFGKDVLRR LDRMPEVQLL CAVSGEYDYV AWLRADSPER
LNDLLDQIGT LEGVERTTTS IILSRKIDRG TIGG