| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1451 |
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| Symbol | |
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| ID | 6178539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1614533 |
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| End bp | 1615924 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641681208 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001808155 |
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| Protein GI | 172060503 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.211252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACCA CCTCCGCAAT CGCAGAACTC GATCTGTACG TCTGGGAAGG CAAGGCGGAC
ATTGTCGACC GCGTTGCCCG CTGCATGGCG AGCTTCGACG TCGAAGTGAT CCGCGCCGAC
AATGCGGAAA TCTCGCCGGA GCGCGCCGCA TTGCGGCCCT CGCTCGCGAT CATCAGCGTG
ACGATGATCG AGACCGGCGC GGCGTTCCTG CGCGACTGGC AAGCCAACAT CGGCATGCCG
GTCGTCTGGG TCGGCGCGGC GCGCGACCAC GACGCATCGC AATATCCGCC CGACTATTCG
CACATTCTGC CGCTCGACTT CACCTGCGCC GAACTGCGCG GGATGATCGG CAAGCTCGTC
ACACAGCTGC GCGCGCACGC GGCGGAAACG CTGCAGCCGT CCGAACTCGT CGCGCACTCG
GAGTCGATGC AGGCGCTGCT GCACGAAGTC GACACGTTCG CCGACTGCGA CACCAACGTG
CTGCTGCACG GCGAAACCGG TGTCGGCAAG GAGCGGATCG CGCAATTGCT CCACCAAAAG
CATTCGCGCT ATCGCAACGG CGAATTCGTG CCGGTCAACT GCGGCGCGAT CCCCGACGGC
CTGTTCGAAT CGCTGTTCTT CGGGCATGCG AAAGGTTCGT TCACCGGCGC GGTTGTCGCG
CATAAAGGCT ATTTCGAACA GGCGGCGGGC GGCACGCTGT TCCTCGACGA AGTCGGTGAC
CTGCCGTTGT ACCAGCAGGT CAAGCTGTTG CGCGTGCTCG AGGACGGCGC CGTGCTGCGG
GTCGGCGCGA CGTCGCCGAT CAAGGTCGAT TTCCGTCTCG TCGCGGCCAG CAACAAGAAG
CTGCCGCAAC TCGTGAAGGA TGGCCTGTTC CGCGCGGATC TGTACTATCG GCTCGCGGTG
ATCGAGCTGA GCATTCCGTC GCTGGAGGAG CGCGGCGCGG TCGACAAGAT CGCGCTGTTC
AAGTCGTTCG TCGCGGAAGT GGTGGGCGAC GAGCGGCTCG CGCAGCTGTC CGATCTGCCT
TACTGGCTCG CGGACGCGGT CGCGGACAGC TATTTCCCCG GCAACGTGCG CGAACTGCGC
AACCTCGCGG AGCGCGTCGG CGTGACGGTG CGGCAGACGG GCGGCTGGGA CGCGGCGCGG
CTGCAGCGGC TGGTCGCGCA TGCGCGCAAC TCGGCGCAGC CGGTGCCGGT GGAAAGCGCG
GCGGAAGTCT TCGTCGACCG AAGCAAGTGG GACATGAACG AGCGCAGCCG CGTGATCGCG
GCGCTCGACG CAAACGGCTG GCGGCGCCAG GATACGGCGC TGCAGCTCGG CATCAGCCGC
AAGGTGTTGT GGGAAAAGAT GCGCAAATAT CAGATATTCG ACGAAGAGCC CGAGACCCGC
GAAAGCGAAT AA
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| Protein sequence | MRTTSAIAEL DLYVWEGKAD IVDRVARCMA SFDVEVIRAD NAEISPERAA LRPSLAIISV
TMIETGAAFL RDWQANIGMP VVWVGAARDH DASQYPPDYS HILPLDFTCA ELRGMIGKLV
TQLRAHAAET LQPSELVAHS ESMQALLHEV DTFADCDTNV LLHGETGVGK ERIAQLLHQK
HSRYRNGEFV PVNCGAIPDG LFESLFFGHA KGSFTGAVVA HKGYFEQAAG GTLFLDEVGD
LPLYQQVKLL RVLEDGAVLR VGATSPIKVD FRLVAASNKK LPQLVKDGLF RADLYYRLAV
IELSIPSLEE RGAVDKIALF KSFVAEVVGD ERLAQLSDLP YWLADAVADS YFPGNVRELR
NLAERVGVTV RQTGGWDAAR LQRLVAHARN SAQPVPVESA AEVFVDRSKW DMNERSRVIA
ALDANGWRRQ DTALQLGISR KVLWEKMRKY QIFDEEPETR ESE
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