Gene BamMC406_1434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1434 
Symbol 
ID6176960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1596407 
End bp1596817 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content64% 
IMG OID641681191 
Producthypothetical protein 
Protein accessionYP_001808138 
Protein GI172060486 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00387753 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0246951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCGT ATCGCGATCT GACCGACCAC CAGTGGCACT GCGTCGTGCC GCTTCTGCCT 
GAAATGCAGC CGCGCACCGA GTTGCGCGGC CGGCCGCTGG CCAACACGCG CGCCGTCCTG
AACGGCGTTC TATGGGTTAT CTATAGCGGC GCGACCTGGT CCGCGATGCC GCGTCGTTAC
CCTTCATACC AGACATGCCA TCGCCGCTTC AAGGTCTGGC ACGAGACCGG CACGTTGATG
CAGGTGATGC GCGAGCTGTA TGGCGACGCA GGCGTGAATC TGTGCAACGA ACTGTCCACG
CGCATGCGCA AGCACACGCA ATCGAAGGCG GCAGAGGCGC GGGGTGCCGC GGCGCCGGTG
TATCGTGCAC CGGGCAGCTA TGCGTCGGAT ACGCTGAAGC ACGCAGCGTG A
 
Protein sequence
MTPYRDLTDH QWHCVVPLLP EMQPRTELRG RPLANTRAVL NGVLWVIYSG ATWSAMPRRY 
PSYQTCHRRF KVWHETGTLM QVMRELYGDA GVNLCNELST RMRKHTQSKA AEARGAAAPV
YRAPGSYASD TLKHAA