| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1178 |
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| Symbol | |
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| ID | 6176663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1300548 |
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| End bp | 1301780 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641680934 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001807885 |
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| Protein GI | 172060233 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0817029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.188851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCGG TGCAGGCGAG GGTGCTCGCG CTGTTTGCGC TCGGGTATTT CGTGTCGTAC
GTGTTCCGCG GCGTCAATCT CGGCTTCGCG CCGTTCGTCA CGCACGAGCT CGGGCTGTCG
GCCGCCGATC TCGGGCTGCT CACCAGCCTC TATTTCCTCG GCTTCGCCGG CGCGCAGATT
CCGGCCGGCG TGCTGCTCGA CCATTTCGGC CCGCGCCGCG TGACGGCGGG GATGCTGCTG
TTCGCAGCCG CCGGTGCCGC GGTGTTCGGC GTCGCGCACG ACCTCGGCAC GATGATGATC
GGCCGGCTCC TGATCGGCGT TGGCGTATCG GTGTGCCTCG GTGCGGCGTT CAAGGCGCTC
GCGCAGCATT TTCCCGTCGG CCGGTTGCCG CTCCTCAACG GTCTCGTGAT GGCGGTCGGC
GGCCTCGGCG GCGTCGCGGT CGGCTCGCCG CTGACCTGGC TGCTCGGGCT CGTGAGCTGG
CGCGCGATCT GCGGCGGCCT CTCGGTGCTG ACGATCATCG TCGCCGCGGC GATCGGCTTC
GGCGCGCCGG AAGCCGAACA GCCACGCCAC CAGGGCGGGC TCGTCAGCCA GTTCAAGGGC
ACCTGGCACA TCCTGAGCAG CCGCGCGTTC TGGAAGATCT CGTCGTTCTC GGTCGTCACG
CAGGGCGTGT TCTACGCGAT GCAGTCGCTG TGGGTCGGGC CGTACCTGCG CGATGTCGCG
GGGTTCGATG CGCAGCGCGC GGCGCAACTC GTGTCGGTGC TCGGCTTCGC GATGATGGCC
GGCTGCGTCG GCTTCGGCGC GGCGGCGCGC ATGCTCGATC GGCGCGGGGT GTCCGTCCAG
GCATTTTGCG GCGTCGGCAT GGCGCTGTTC GTCGCGACGC AAGCCGCGAT CGTCGCACGC
GTCCCCCTGC CGCCGGCCGT ACTATGGGCG GCGTACGGGA TGTTCGGCGG CGTCGGAATC
CTGACCTATG CGGTGCTGGC CCGTCATTTC CCGGCCCATC TGATCGGCCG CGCGAACACG
ACGCTCACGC TCGTGATCTT CGTGCTGATC TTTGCGTTCC AGATCGGCAT CGGCGCGGTG
CTGTCGTACT GGCCGGCGAT CGACGGCCAT TACCCGGCCA CCGCGCACGT CAGCGCGTGG
AGCGCGCTGC TCGCGCTGCA ACTCGCGAGC GCGGTCTGGT ACGCGTGGCC CGAGCGCGGC
GCTGGCAAGC AGGGTGATCC GGCGGTACGC TGA
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| Protein sequence | MSSVQARVLA LFALGYFVSY VFRGVNLGFA PFVTHELGLS AADLGLLTSL YFLGFAGAQI
PAGVLLDHFG PRRVTAGMLL FAAAGAAVFG VAHDLGTMMI GRLLIGVGVS VCLGAAFKAL
AQHFPVGRLP LLNGLVMAVG GLGGVAVGSP LTWLLGLVSW RAICGGLSVL TIIVAAAIGF
GAPEAEQPRH QGGLVSQFKG TWHILSSRAF WKISSFSVVT QGVFYAMQSL WVGPYLRDVA
GFDAQRAAQL VSVLGFAMMA GCVGFGAAAR MLDRRGVSVQ AFCGVGMALF VATQAAIVAR
VPLPPAVLWA AYGMFGGVGI LTYAVLARHF PAHLIGRANT TLTLVIFVLI FAFQIGIGAV
LSYWPAIDGH YPATAHVSAW SALLALQLAS AVWYAWPERG AGKQGDPAVR
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