Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1048 |
Symbol | |
ID | 6177363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1140047 |
End bp | 1142191 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641680804 |
Product | phospholipase C, phosphocholine-specific |
Protein accession | YP_001807755 |
Protein GI | 172060103 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3511] Phospholipase C |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.898886 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGAT CGAACCGTCG TGACTTCCTG CGCGTCGCCG CCGGCACTGC CGGCGCCGCC GCGCTGAACC TGTTCCCGCC CGTGATCCGC GATGCGCTTG CGATTCCGGC GAACCGCCGT ACCGGCACCA TCCGCGATAT CGAACACATC GTGATCCTGA TGCAGGAGAA CCGTTCGTTC GACCACTACT TCGGCACGAT GCGCGGCGTG CGCGGCTTCG GCGATCCCCG CCCGCTGCGC CTCGCGAACG GCAAGTCGGT GTTCCATCAG CCGGTCGGCC CGGCCGAGCT GCTGCCGTTT CACCCGGGCG CGGACAAGCT CGGCCTGCAG TTCCTGCAGG ACCTGCCGCA CGGCTGGCAG GACATGCACG CCGCGTGGAA CAAGGGCCGC TACGACCGGT GGGTCCCGAA CAAGGGCACC ACGACGATGG CGTACCTGAA GCGCGACGAC ATCCCGTTCC ACTACCAGCT CGCCGACGCA TTCACGATCT GCGACGCGTA TCACTGCGCG ATCCCGAGTT CGACCGACCC GAACCGCTAC TACATGTGGA CGGGCTACGT CGGCAACGAC GGCACGGGCG GCGGCCCGGT GCTCGGCAAC GAGGAAAAGG GCTACGGCTG GACGACCTAT CCGGAAGTGC TCGAGCAGGC CGGCGTGTCG TGGAAGATCT ACCAGGACGT CGGCACCGGG CTCGACGCGA ACGGCTCGTG GGGCTGGACG CAGAACCCGT ACATCGGCAA CTACGGCGAC AACGCGCTGC TCTACTTCAA CCAGTACCGC AGCGCGCTGC CCGGCACGCC GCTGTACGAC AAGGCGCGCA CCGGCACCAA CATCAGCGCC GGCGGTACGC TGTTCGACGT GCTGCAGCAG GACGTGAAGA ACGGCACGCT GCCGCAGGTG TCGTGGATCT GCGCGCCGGA AGCGTACTCG GAACACCCGA ACTGGCCGGC CAACTACGGC GCGTGGTACA TCGAGCAGGT GCTGAAGGTG CTCGTGTCGA ACCCGGACGT GTGGAGCAAG ACCGCCCTCT TCATCACCTA CGACGAGAAC GACGGCTTCT TCGACCACGT GCCGCCGCCG TTCGCGCCGC AGTCGCGCGA CAACGGGCTG TCGACGGTCG CGACGACCAA CGAGGTGTTC GCCGGCGACG CGTCGCACAT GGCCGGCCCG TACGGGCTCG GGCCGCGCGT GCCGATGCTG GTCGTGTCGC CGTGGACCAA GGGCGGCTGG GTCTGCTCGC AGACCTTCGA TCACACGTCG CTGCTGCAAT TCATCGAAGC GCGCTTCGGC GCGCAGTATC CGGTGACGGC CGCCAACGTG TCGCCGTGGC GCCGTGCGGT GTGCGGCGAC CTGACGTCGG CGTTCGAATT CGCGACCGCC GACACCGCAT GGCCGACGCT GCCCGACACG AGCGGCTATG CGCCGCCCGA CCGCGTGCGC CACCCCGACT ACATCCCGGT GCCGCCGGTG CTGCAGAAGC TGCCGAAACA GGAGGCCGGG CTGCGTCCGG CGCGCGCGCT GCCGTACGAG CTGTTCGTGC ACGGCCGCGT CGAAGCCGCG AACGGCCTGT TCCGGCTGAC CTTCGCGAAC ACCGGCCGCG CGGGCGCGGC ATTCCAGGTG CAGTCGCGCA ACCGCGTCGA CGGCCCGTGG GCGTACACGG TCGAAGCCGG CAAGCGGGTC GCCGACACGT GGAGCGCCGC GGCATCGCTC GGCCTGTACG ACCTCGACGT GTACGGCCCG AACGGCTTCT ACTGCCATTT CCGCGGCCCG TTCGCGACCG GCGTCGGCAG CGCGAGCGTG AACCCCGAGG TGATCTACGG CTACGACGTC GCGAACGGCA ACATCACGCT GCGCCTGATG AACCGCGGCC ACAAGACCGT GCAGCTCAAG GTGACGAACG CATACGGCCA CGGCCGCGCG CGCACGTTCG ACCTCGCGCC GGGCGCGCAT GTCGACGACT ACTGGGATCT GCGCGGCAGT CACGGCTGGT ACGACCTGAC CGTCAGCGAC GGCCGTCCGC TCGGCTTCCT GCGCCGCTTC GCTGGCCACG TCGAGACCGG CCGCCCGAGC ACGAGCGACC CGGCCATCCG CACGAACGCG TCGCACGACG ACGCCGAAGC CGCATCGGAC GCCCTGTCCG ACTGA
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Protein sequence | MTRSNRRDFL RVAAGTAGAA ALNLFPPVIR DALAIPANRR TGTIRDIEHI VILMQENRSF DHYFGTMRGV RGFGDPRPLR LANGKSVFHQ PVGPAELLPF HPGADKLGLQ FLQDLPHGWQ DMHAAWNKGR YDRWVPNKGT TTMAYLKRDD IPFHYQLADA FTICDAYHCA IPSSTDPNRY YMWTGYVGND GTGGGPVLGN EEKGYGWTTY PEVLEQAGVS WKIYQDVGTG LDANGSWGWT QNPYIGNYGD NALLYFNQYR SALPGTPLYD KARTGTNISA GGTLFDVLQQ DVKNGTLPQV SWICAPEAYS EHPNWPANYG AWYIEQVLKV LVSNPDVWSK TALFITYDEN DGFFDHVPPP FAPQSRDNGL STVATTNEVF AGDASHMAGP YGLGPRVPML VVSPWTKGGW VCSQTFDHTS LLQFIEARFG AQYPVTAANV SPWRRAVCGD LTSAFEFATA DTAWPTLPDT SGYAPPDRVR HPDYIPVPPV LQKLPKQEAG LRPARALPYE LFVHGRVEAA NGLFRLTFAN TGRAGAAFQV QSRNRVDGPW AYTVEAGKRV ADTWSAAASL GLYDLDVYGP NGFYCHFRGP FATGVGSASV NPEVIYGYDV ANGNITLRLM NRGHKTVQLK VTNAYGHGRA RTFDLAPGAH VDDYWDLRGS HGWYDLTVSD GRPLGFLRRF AGHVETGRPS TSDPAIRTNA SHDDAEAASD ALSD
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