| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_3620 |
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| Symbol | |
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| ID | 4884934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009074 |
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| Strand | + |
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| Start bp | 3542443 |
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| End bp | 3543891 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640129548 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001060625 |
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| Protein GI | 284159962 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCGA TGAAGCCCGC ACGCACCCTC GCCATGGCCG GCGCGCTCGC GCTCTTCGCA
TCGCAAGCGG CGCACGCGCA ATGGCTCGAT CTCTACGGAA CCCGAAAGAA TGTGTCGGCT
TCTCCCGCCG CGCCGATGCT GAAGAACGCG ACATGCCAGC CCGAGCTCGC GGACCGTCCG
ATCGAGCTCG AAGACGCGAT CCTGCAGGCG ATCTGCGCGA ACCCGCAGGC ACGGCGCGCG
TGGGCCGATG CGCGCGCGCA GGCCGCCCAG CTCGGCGTGA AGGAGGCGGC GTATCTGCCG
ACGCTCAATG CAACAGCGGG CATTCAGCGC AACTGGCAAA CGACGACGTA TGAGCAGGAC
CTCGGCCCGA TCACGCTCAC CGCCGACCAG AAGCAGATCC AGACGAGCCG CTACGGCGCG
TTGAACCTGA GCTGGGTGCT GTTCGATTTC GGCAAGCGCA GCGCGGCGCT CAGGCAGGCG
CGCGAGCTCC TCGCCGCCGC CAACGCGACG CAGGACGACA CGCTCCAGAC CCTCCTGTTC
AATGCCGCCC AGGCGTATTA CAACCTGCGC GACACGCAGG CGGCGCTCGA CGCGGCGCGC
ACGACCGAAC GCGTCGCGCA GGATAGCCTC ACCGCGGCGA AGGCGAAGCA CGACGCCGGC
GCCGGCACGC TGAGCGATCA ACTGCAGGCG CAAACGAGCT ATCGCCGCGC GGTGCTCGAT
CGCGTGAGCG CCGAAGGCGA CGTGCGGAAC GCGACGGGCG TGCTCGCCGT CGCGATGGGG
CTCGACGCGA ACACGCCGCT GCGGATCGCG ACCGCCGAGC CGCCGGTCGA TCGCAACGCG
TTCGCCGAAG GCATCGCGCA ATTGATCGAC GAGGCGAAGC GGCAGCATCC GAAGCTCGTC
GCCGCGCGCG CGAAACTCGA CGCGGCGCGC GCGAACGTCG ATGCGGTGCG TGCGCAGGGC
CGCCCGACCA TCTCGCTGAC CGGCAGCCTC AGCCGCAACA GCCCGTCGTA TCAGCAGCAG
CCGGGCATCC AGACCACCGC GAGCCACGGC AGCATGATCG GCGTGCAGGT GACGATCCCG
CTCTTCGAAG GCTTCGCGTC CGGCTACCGC GTCGCGGCCG CGCAGGCACA GGCGGATGCG
CAGGAGGCCG ACGTGCAGAA CACCGAGCTG AACGTCTCGC TCGACGTGTG GAAGAGCTAT
CAGAGCCTGC AGACCGACAC CGCGAATCTC GACAATTCGA AGGACCTGCT CGGCGATGCG
CAACGCTCGC TCGACATCGC ACGGGGCCGG TACAAGGCGG GCGTCGGCAC GTTCACGGAG
TTGCTCAATG CGCAGACCGC GCTCGCGGAC GCGCAGAAGC AGCGCGTGCA GGCGCTGTCG
AAATGGCGCA CCGCGCGGCT CAAGCTCGCG GCGAGCCTCG GCAGCATCGG CCTGTGGTCC
GCCCATTGA
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| Protein sequence | MIAMKPARTL AMAGALALFA SQAAHAQWLD LYGTRKNVSA SPAAPMLKNA TCQPELADRP
IELEDAILQA ICANPQARRA WADARAQAAQ LGVKEAAYLP TLNATAGIQR NWQTTTYEQD
LGPITLTADQ KQIQTSRYGA LNLSWVLFDF GKRSAALRQA RELLAAANAT QDDTLQTLLF
NAAQAYYNLR DTQAALDAAR TTERVAQDSL TAAKAKHDAG AGTLSDQLQA QTSYRRAVLD
RVSAEGDVRN ATGVLAVAMG LDANTPLRIA TAEPPVDRNA FAEGIAQLID EAKRQHPKLV
AARAKLDAAR ANVDAVRAQG RPTISLTGSL SRNSPSYQQQ PGIQTTASHG SMIGVQVTIP
LFEGFASGYR VAAAQAQADA QEADVQNTEL NVSLDVWKSY QSLQTDTANL DNSKDLLGDA
QRSLDIARGR YKAGVGTFTE LLNAQTALAD AQKQRVQALS KWRTARLKLA ASLGSIGLWS
AH
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