| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2572 |
|---|
| Symbol | |
|---|
| ID | 3692461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 3091289 |
|---|
| End bp | 3094678 |
|---|
| Gene Length | 3390 bp |
|---|
| Protein Length | 1129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637732826 |
|---|
| Product | serine protease |
|---|
| Protein accession | YP_337722 |
|---|
| Protein GI | 76818314 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
|---|
| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGGC ACAAAAAACG GAAAACGATG AAGCGCAGCG GAGCGAAGCT GCTTGCGCCC
GTGGTCGTCG CGGCCGCCGC CGCGGTCGCG GCCCGCCCCG GCTGGGCGCA GGCCGCGCCG
TACCCGGATC CGGGCCGGCG CGGCGATCCG GCGAGTTGGC GCACGCCGGA ATTCACGAAC
GCGTGGGGGC TCGGCGCGAT GCACGCCGAG TATGCATACG CGGCCGGCTA TACCGGCGCG
AACGTCGCGA TCGGCGTGCT GGACTCCGGC TACTACGCGC AGCATCCGGA ACTACCCGAC
AGCCGCTTCG TTCCGGTGAC GGCCGCGGGC GTGTCCGGCG TGCTGAACCC GAACAACAAC
AATCACGGCA CGCTGGTGAG CGGCGTCGTC GGCGGCGCGC GCGACGGTGT CGGCATGCAC
GGCGTCGCAC CCGACGCGAC GGTGTACGAA GGCAACACGA ACGCGACCGA CGGCTTCCGG
TTCGGCGTAT CGGATCCGAA GTTTCCCGCG TCGGATGCGA AGTATTTCGC CGAGGCCTAC
GATGCGCTCG CCGCAAAGGG CGTGCGGATC ATCAGCAACA GCTGGGGCTC GCAGCCGGCC
AACGAGAACT ACAGCACCCT GAACAAACTC ACCGATGCCT ACAAGCTGCA CGAGGCGGTG
CGCACGGCGA CCGGCCGGGG CACGTGGCTC GACGCGGCGG CGAAGGTGTC GCGCGACGGC
GTGATCAACA ACTTCAGCTC GGGCAACACC GGCTACGACA ACGCGAGCCT GCGCGGCGCG
TATGCGTACT TCCACCCCGA ACTCGAAGGG CACTGGATGA CGACGACGGG CTACGACCAG
TTGAGCGGCC AGGTCTACAA CCAATGCGGG ATCGCGAAGT GGTGGTGCGT GATGGCGCCC
ACGGGCGTGC CGTCGACGTC ATATTCGGGC GGCGCGGCGG CGCCGACCGG GGCGACCTAC
GCGAACTTCA ACGGCACGTC GGCCGCCGCG CCGCACGCGT CGGCGGCGCT CGCGCTGATC
ATGGAGCGCT TTCCGTACAT GACGAGCGAG CAGGCGCTGT CGGTGCTGTT CACGACCGCG
CAGAACATGG AGCCGGACCC GAGCCGGCCG GACTACACGA ACAACGGGCT GTTCTCGACC
GTGCATCCGG CGAAGCCCGG CGCGTCGGGC GTGCCGAACG CGTTCGGCGG CTGGGGGCTC
GTCGACCTGC GCCGGGCGAT GAACGGCCCG GGCCAACTGC TCGGCACGTT CAACGCGGCG
CTGCCTGCGG GCACCGCCGA CGTGTGGTCG AACGACATCT CCGACGTCGC GCTCGCCGCG
CGCAAGCGCG AGGACGACGC CGAGCACCGC GCGTGGCTCG ACACGCTGAG GACGAAGGGA
TGGGAGCACG GGCTGCCCGC CGGCGCGAGC GATGGCGACC GGATCGACTA TGCGCTCGGC
GTCGCGCGCG AAACCGCGTA TCAGGCGCGC GAGTATCAGG GCAGTCTCGT GAAATCGGGC
GGCGGCACGC TGACGCTCGC CGGCGCGAAC ACCTATCGCG GGCCCACGAC GGTCGACGGC
GGCGAATTGA GGATCGACGG CTCGATCGCC GCGCGCGCCG TCGTCAATCC GGCGGGCCGG
CTCACGGTGA ACGGCCGCGC GGCCGACATC GCGGTCAACG GCGGCGTGGC GACGATCGCC
GGGACGAGCG CGAACCTGTC GATCGACCGG CAGGGCCGGG CCGCCGTGAC AGGGACGACG
GCGGACGTGC GCGTCGCGAG CGGCTTTGCA TCGCTCGGCG GCACGAGCGG CAACGTCGCG
GTGGGGGCGC TCGGCGTCGC CGCGATCACG GGCCGCACGG CCGACGTGGC GGTCGACGGC
GGCCGCGCGT CGCTCGACGG CGCGAGCGGC AACGTCGCGG TCGGCAACGG CGGCGTCGTG
AGCGGCAGCG GCACGGTGCG CACGCTCACG GCGGCCGCGA ACGGCACGGT CGCGCCCGGC
CATTCGGTCG GTACGCTGAC GGTGTCGGGC GACGTGCGCT TCGCGCCGGG TTCGATCTAC
GCGGTCGAGG TGTCGCCGGG CGGCGCGGGC GACCGGATCG TCGCGGGCGG CCGCGCGCAA
ATCGACGGCG GCGCGTTGGC GCTCGCGCTC GAGAACACGC CGCCGCCGCT CACGCCCGAG
CAGTCGCGCT CGGTGCTCGG CCGTCGCTTC GAGATCCTGA ATGCGGCGGG CGGCGTGGCC
GGCCGTTTCG ATGCGCCGAG CGGCTATCTG TTCGTCAATC CGGTGCTCGC CTATGGCCCG
ACGACCGTGA GCCTCACGAT CGATCGTAAC GCGACGCCGT TTGCAAGCGT CGCGCGGACC
GCGAACGAGC GCGGCGTCGC CGATGCGCTC GAAACGGCGG ACCCGGGCAG CGCGGTTTAC
AACAGCGTGC TGTTCGCGGC GTCCGCGCAG GCGCCGCAGG CGACGCTCGC GCAACTGACG
GGCGAGATCT ATCCGGCCGC CTACGCGGCG CTCGTCAACG AAAGCCGGCA AGTGCGCGAA
GCGGCGCTCG AGCGCCTGTG GACGGCGCGC GGCGCGCCGG GCCGCGCCGG CGCCTGGGCG
CGGCTGCTCG GCGCGTGGGG CAGCGCGCGC GGCGGCGACG TGAACGGCTA CACGAGCTCG
ACGGGCGGCT TCCTCGCGGG CGCGGACGCG GCGCTGCTCG ACAGCGTGCG GGCGGGCGGC
TTCGCCGGCT ACAGCCACAC CGGCGTGAAC CTGAGGAATC AGCCGTCGTC CGCGTCGTTC
GACAGCTTCC ATCTCGGCGC ATACGCGGGG TGGCAGCCCG GCGCACTCGG CGTGCGAATC
GGCGCGGCGC ATGCGTGGCA TCGCGGCGGT GTCGATCGCG CGGTGCAATA TGGCGCGGTT
GCCGAGAACG AAACGACGGC GCTGCACGCG GAAACGACGC AGGTGTTCGG CGAGGCCGGC
TATCGGTTCG CGCTCGATGG CGCCGCGACG CTCGAGCCGT TCTTCGGCGT CGCGTATGTG
CATCTGAAGA ACCAGGGGAC GACGGAAACC GGCGGCGCGG CGGCGTTGCG CGTGCGGCAA
GGCAATCACG ACGTGACGTT CTCGACGCTC GGCGTGCGCG GCGAAACGCG GCTTGGCCTG
ACGTCGCGAC TGCAGTTGAC GCTGCAGGGC AGCGCGGGCT GGCAGCATGC GCTGACGGAC
GGGCAGCCGA GCGGCACGCT CGCGTTCGCG ACGGGGAGCG ACACGTTCAC CGTGTCGAGC
GTGCCGGTTG CGAAGGATGC GGCGGTGCTG AACGTGGGCG CCGGGCTCGA GCTCGGCAAG
AACGGATGGC TGCGCGTCGG CTATTCCGGC TCGCTCGCGA GCCGTCAGTC CGAGCACGCG
GTGCAAGGCA GCCTGCACTG GAAGTTCTGA
|
|---|
| Protein sequence | MTRHKKRKTM KRSGAKLLAP VVVAAAAAVA ARPGWAQAAP YPDPGRRGDP ASWRTPEFTN
AWGLGAMHAE YAYAAGYTGA NVAIGVLDSG YYAQHPELPD SRFVPVTAAG VSGVLNPNNN
NHGTLVSGVV GGARDGVGMH GVAPDATVYE GNTNATDGFR FGVSDPKFPA SDAKYFAEAY
DALAAKGVRI ISNSWGSQPA NENYSTLNKL TDAYKLHEAV RTATGRGTWL DAAAKVSRDG
VINNFSSGNT GYDNASLRGA YAYFHPELEG HWMTTTGYDQ LSGQVYNQCG IAKWWCVMAP
TGVPSTSYSG GAAAPTGATY ANFNGTSAAA PHASAALALI MERFPYMTSE QALSVLFTTA
QNMEPDPSRP DYTNNGLFST VHPAKPGASG VPNAFGGWGL VDLRRAMNGP GQLLGTFNAA
LPAGTADVWS NDISDVALAA RKREDDAEHR AWLDTLRTKG WEHGLPAGAS DGDRIDYALG
VARETAYQAR EYQGSLVKSG GGTLTLAGAN TYRGPTTVDG GELRIDGSIA ARAVVNPAGR
LTVNGRAADI AVNGGVATIA GTSANLSIDR QGRAAVTGTT ADVRVASGFA SLGGTSGNVA
VGALGVAAIT GRTADVAVDG GRASLDGASG NVAVGNGGVV SGSGTVRTLT AAANGTVAPG
HSVGTLTVSG DVRFAPGSIY AVEVSPGGAG DRIVAGGRAQ IDGGALALAL ENTPPPLTPE
QSRSVLGRRF EILNAAGGVA GRFDAPSGYL FVNPVLAYGP TTVSLTIDRN ATPFASVART
ANERGVADAL ETADPGSAVY NSVLFAASAQ APQATLAQLT GEIYPAAYAA LVNESRQVRE
AALERLWTAR GAPGRAGAWA RLLGAWGSAR GGDVNGYTSS TGGFLAGADA ALLDSVRAGG
FAGYSHTGVN LRNQPSSASF DSFHLGAYAG WQPGALGVRI GAAHAWHRGG VDRAVQYGAV
AENETTALHA ETTQVFGEAG YRFALDGAAT LEPFFGVAYV HLKNQGTTET GGAAALRVRQ
GNHDVTFSTL GVRGETRLGL TSRLQLTLQG SAGWQHALTD GQPSGTLAFA TGSDTFTVSS
VPVAKDAAVL NVGAGLELGK NGWLRVGYSG SLASRQSEHA VQGSLHWKF
|
|---|
| |