| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1762 |
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| Symbol | sqs |
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| ID | 3692222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 2153313 |
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| End bp | 2154854 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637732016 |
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| Product | squalene/phytoene synthase family protein |
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| Protein accession | YP_336919 |
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| Protein GI | 76819243 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.265717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGTGCG CGCGCCGTTT ACTTCGCGGT TTCGTCGAGG CCGCGTTGCA ACAGTTCGGT
CAACAATCCG GTCATCCCGT CCGGATGCGC GGCCGCCCGC TCGTTCAGGC GCGCGACGAG
CTCGATGTTC AGCTTGCACG CGAACGGCAC GAGGCCCTGC GCCTGTTCGA GCCTGCGCCG
CTCGCGGCGA TCGGCCGCCG CATCTTCGGC GCCCTTGCCG AAGCGCGCGG ATGTCGTCTG
CTTCATCGCG TGCGTCAGCT TCAACGCCTT GTTCTTCTCG AGATCGGTTT TCTTCATCGC
CATCGCGGTC ACCTCTTGCA GGAAAGGATG CGATTGTACG CATTGCCGCG CGGCGCGGAT
ATCGGCCGCC GCGCGCCGTG CGGCGCGCCC GGTCGCACCC TGCGCGGCCG GCCGTGCGCG
AAGCGCCGGC GGCCCGCGCG CATTTGCCGA TACAATGCGG CAGCCATTCG TATGACCGAC
CTGATCCGAT CCATGGGCAA TTCCACCCGA GCCTTTCTGC TGGGCCCCCT GCTGAAGGGC
GTGTCGCGCT CCTTCTATCT GACGTTGCGC GTGCTGCCGC AAGGCATGCG CGACCCGATC
GGCCTTGCGT ATCTGCTCGC GCGCGCGGCC GACACGATCG CCGACACGTC GCTGATCCCG
CCCGCTCAGC GGCTCGAACT GCTGCTGTCG CTGCGCGCGC AGATCAACGG CGCGCCCGAT
CCGCACGCGC TCGCGCGGAT CGCGGGCGAG GTCGCGGGGC AGCAGGCGCA GACGGACGAG
AAGACGCTGC TCGAATCGCT CGGCCCCGCG CTCGCGGTGC TGTCGCAATT GAGCGCGCCC
GATCGCGCCG CGGTGCGCGG CGTCGTCACC ACGCTCACCG AAGGGATGGA ATTCGATTTG
CGCACGTTCC CGGACGAATC GTCGGGCCGC GTCGTCGCGC TGCGGGAATG GCCGGCGCTC
GATCGCTATA CGTATCTCGT TGCCGGCTGC GTCGGCGAAT TCTGGACGAA GATGACGTGC
GCGCATCTGC CCGGGCTGCT GACCGAGCGG GAGGACACGA TGAGCGAGCG CGGCATCCGC
TTCGGCAAGG CGCTGCAGAT GACCAACGTG CTGCGCGACT GCGGCAGGGA CCTGCGGATC
GGCCGCTGCT ATCTGCCGCA GGCGATGCTG GACGAATACG GGCTGCGCGC GGAGGATCTG
CTGGGGCCGG GCGCTTCGCT GCGCGCACGG CCGCTGATGC ATGCGCTCGT GCGCACGACG
CTCGCGCATT TTCACGCGGG CATCGATTAT ACGTTCGCGA TTCCGCGCCG CGCGCCGCGC
CTGCGGCTTG CCTGTTTCTG GCCGATCGCG ATCGGCCTGC GGACGCTCGC GCTGCTCGCG
TCGAACGACG CGTGGCTCGA TCCGGCGCGC GCGTCGAAGG TGCGGCGCGG CGACGTCTAC
CGGATCCTCG CGTATTCGCT GCCGCTCGCG ATGTCGAACG GCGCGCTGCG CGCGTGGCTC
GACCGCCTGA TCGCGGACGT CGAGGCGCGG CTCATCGCGT GA
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| Protein sequence | MRCARRLLRG FVEAALQQFG QQSGHPVRMR GRPLVQARDE LDVQLARERH EALRLFEPAP
LAAIGRRIFG ALAEARGCRL LHRVRQLQRL VLLEIGFLHR HRGHLLQERM RLYALPRGAD
IGRRAPCGAP GRTLRGRPCA KRRRPARICR YNAAAIRMTD LIRSMGNSTR AFLLGPLLKG
VSRSFYLTLR VLPQGMRDPI GLAYLLARAA DTIADTSLIP PAQRLELLLS LRAQINGAPD
PHALARIAGE VAGQQAQTDE KTLLESLGPA LAVLSQLSAP DRAAVRGVVT TLTEGMEFDL
RTFPDESSGR VVALREWPAL DRYTYLVAGC VGEFWTKMTC AHLPGLLTER EDTMSERGIR
FGKALQMTNV LRDCGRDLRI GRCYLPQAML DEYGLRAEDL LGPGASLRAR PLMHALVRTT
LAHFHAGIDY TFAIPRRAPR LRLACFWPIA IGLRTLALLA SNDAWLDPAR ASKVRRGDVY
RILAYSLPLA MSNGALRAWL DRLIADVEAR LIA
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