Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1039 |
Symbol | |
ID | 3694531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 1303769 |
End bp | 1307017 |
Gene Length | 3249 bp |
Protein Length | 1082 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637731293 |
Product | RND efflux system, cytoplasmic membrane extrusion protein |
Protein accession | YP_336197 |
Protein GI | 76817959 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGCGC CGAGCGTCGT TCGTTTTTCC GACGTCAGCC TGCGCTACGG CAAGACCGTC GCGCTCGAGC GGATCACGCT CGAGATCCCG GCCGGTCTCA CGATCGGGTT GATCGGGCCG GACGGCGTCG GCAAATCGAG CCTGCTCGCG CTCGCGGCCG GCGCGCGCGC GCTGCAGACG GGCGCGGTCG ACGCGCTCGG CGGCGACATG CGCTCGCGCC GCCATCGCGA GCGCGTGTGC CGGCGCATCG CGTACATGCC GCAGGGGCTC GGCAAGAACC TGTATCCGAC GCTCTCCGTC GAGGAAAACC TGCAGTTCTT CGCGCGCCTG TTCGGCCACG ACGCCGACGA GCGCCGCCGC CGGATCGACG CGCTCACGCG GAGCACCGGC CTCTTTGCGT TCCTGTCGCG GCCCGCGGGC AAGCTCTCGG GCGGGATGAA GCAGAAGCTC GGCCTGTGTT GCGCGCTGAT CCACGATCCC GACCTGCTGA TCCTCGACGA GCCGACGACC GGCGTCGATC CGCTCGCGCG CGCGCAGTTC TGGGATCTGA TCGCGCGCAT TCGCTCGGAG CGGCCGGCGA TGAGCGTGAT CGTCGCGACC GCGTACATGG ACGAGGCGCA ACGCTTCGAC TGGCTGATCG CGATGGACGC GGGCCGCGTG CTCGCGACGG GCGCGCCCGC CGAGCTGCTC GCGCGCACCG GCTGCGATTC GCTCGAGGCG GCCTTCATCG CACTGTTGCC CGAAGACGAA CGGCGCGGCC ACAAGCCGGT GACGCTCGAG CCGCTGCGCG CCGACGCGCA AACCGGCACC GCGATCGAGG CGCGCGGGCT GACGATGCGC TTCGGCGATT TCACCGCGGT CGATCACGTG AGCTTCCGGA TCCGGCGCGG CGAGATCTTC GGCTTTCTCG GCTCGAACGG CTGCGGCAAG TCGACGACGA TGAAGATGCT CACCGGCCTG CTGCCCGCGA CCGAGGGCAC CGCGCAGCTG TTCGGCAAGA CAGTCGATCC GAAGGACATC AATACGCGCC GGCGCGTCGG CTACATGTCG CAGGCCTTCT CGCTGTATAG CGAACTGACG GTGCGGCAGA ACCTCGTGCT GCACGCGCGG CTGTTCGGCG TGCCGGCCGC CGAGATCGAC GCGCGCGTCG ACGAGATGGC GCGCCGCTTC GGCCTCGCCG ACATCTACGA CATGCTGCCG GACAGCCTGC CGCTCGGGAT GCGGCAGCGG CTGTCGCTCG CGGTGGCGAT GGTGCACAAG CCGGAGCTGC TGATCCTCGA CGAGCCGACC TCGGGCGTCG ATCCCGTCGC GCGCGACAGC TTCTGGCAGT TGATGATCGA CCTCGCGCGC CGCGATCGGG TGACGATCTT CATCTCGACG CACTTCATGA ACGAGGCGCA GCGCTGCGAC CGGATCTCGC TGATGCACGC GGGCCGCGTG CTCGCGAGCG ATGCGCCGGC GGCGCTCGTG CGCGCGCGCG GCGCGGCGAC GCTCGAGGAG GCCTTCATCG GCTATCTCGT CGACGCTTCG GCGCAGGAGG CGCAGGGCGG CGCGGGCGGG CGCCCCGGCG CGGGCGAGCG CGCGGCGGGC GAAAGCCTGG CCGGTCGCGG CGCGGCGACC GATGGCGATG CCGACGGCGC GCATGCGCGG CCCGCCGCGT ACGCGAACGG CGCGGCGCAA CATCGCGCGC CCGATGCGGA CGCGGCCGGC ACCGACGTCG CCGCCGAGAC GGGCGCACGC GACGACGCGC GCACCGCACA CGCGGCCGGA CATTCCGCCG GAAACGACGT ACGCGCCACG GTGGGCTCCG AAGTCGGCTC CGAAGTCGGC TCCGATGTCG GCTCCGATGT CGCCTCCGAA GCCGGCCCCG AAGCCGGCCT CGCAGCCAGC GCCGAAAGCG GCGCCGAACG CGCACGCGAA CCTGCGGCGG ACATCACGGC GGATGCCGGC GCCGCAATCG ACGTCGAACC GGGCGCGAGC GCGGAATCGG CCACGGCCGC CGTCGCCCCG GCTCGCCACG CCGAATCCGC CGCCACGTCA CCCCGCGCAG GGAACGCGCC GGCCGGCACG CCGTTCGCCG CCGCGCCGCC GTCGCACGCC GCGCCGGCCG AGCCGCCCCA TCGCGCATTC AGCGCGCAGC GCGCGCTCAG CTACATGTGG CGCGAGATGC TGGAGCTGCG TCGCGATCCC GTTCGCGCGA CGCTCGCGCT GATCGGCTCG CTCGTGCTGA TGTGCGTGAT CGGCATCGGC ATCAGCCTCG ACGTCGAGGA TCTGACCTAC GCGGTGCTCG ACCGCGATCA GACCGAGCTG AGCCACGACT ACGCGCTGAA CCTCTCCGGC TCGCGCTACT TCGTCGAGCG GCCGCCGATC GCCGATTACG CGGCGCTCGA CCGCCGGATG CGCGACGGCG AGCTGTCGCT CGCGATCGAG ATTCCGCCGA ACTTCGCGCG CGACGTCGAG CGCGGCGCGC CCGCGCAGAT CGGCATGTGG ATCGACGGCG CGATGCCGCA GCGCGCCGAG ACGATCCGCG GCTACGCGAT CGGCATGCAC ACGATGTGGC TCGCCGACAA GGCGCGGCAC CGCCTCGGCG TGACGCTCGC GCCGCGCGCG GAAGTGGTCA CGCGCTACCG CTACAACCCG GACGTGAAGA GCCTGCCGGC GATGATCCCC GCCGTGATGC CGCTGCTGCT GCTGATGTTG CCCGCGATGC TCACCGCGCT CGCCGTCGTT CGCGAACGCG AGCTCGGCTC GATCCTGAAC CTGTACGTGA CGCCCGTCAC GCGCACCGAG TTCCTGATCG GCAAGCAGGT GCCGTACGTC GTGCTCGCGA TGCTGAACTT CCTGCTGATG ACGATGCTCG CGCGCATCGC GTTCGACGTG CCCGTCAAGG GCAGCTTCAT GACGCTGTTG CTCGCGGTGC TGATCTTCAA CGTCGTCGCC ACGGGCATCG GCCTGCTCGC GTCGACGTTC ACGCGCAGCC AGGTGGCCGC GATCGTGATG ACGATCATCG GCACGATGAT CCCGACCGTG CAGTTCGCGG GGCTGCTCAC GCCGCTGTCG TCGCTCGAGG GCACCGGGCG CTTGATCGGC CTCGTCTATC CGGCCACCTA CATGCTGTCG ATCAGCCGCG GCGTGTTCAA CAAGGCGCTG TCGCTCCACG AGCTCTACTC GCAGTTCTGG CCGCTCGCCG CCTGCGTACC GGTGATCCTC GGCGCGACCA TACTGCTCTT GAAAAAACAG GAACGCTGA
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Protein sequence | MSAPSVVRFS DVSLRYGKTV ALERITLEIP AGLTIGLIGP DGVGKSSLLA LAAGARALQT GAVDALGGDM RSRRHRERVC RRIAYMPQGL GKNLYPTLSV EENLQFFARL FGHDADERRR RIDALTRSTG LFAFLSRPAG KLSGGMKQKL GLCCALIHDP DLLILDEPTT GVDPLARAQF WDLIARIRSE RPAMSVIVAT AYMDEAQRFD WLIAMDAGRV LATGAPAELL ARTGCDSLEA AFIALLPEDE RRGHKPVTLE PLRADAQTGT AIEARGLTMR FGDFTAVDHV SFRIRRGEIF GFLGSNGCGK STTMKMLTGL LPATEGTAQL FGKTVDPKDI NTRRRVGYMS QAFSLYSELT VRQNLVLHAR LFGVPAAEID ARVDEMARRF GLADIYDMLP DSLPLGMRQR LSLAVAMVHK PELLILDEPT SGVDPVARDS FWQLMIDLAR RDRVTIFIST HFMNEAQRCD RISLMHAGRV LASDAPAALV RARGAATLEE AFIGYLVDAS AQEAQGGAGG RPGAGERAAG ESLAGRGAAT DGDADGAHAR PAAYANGAAQ HRAPDADAAG TDVAAETGAR DDARTAHAAG HSAGNDVRAT VGSEVGSEVG SDVGSDVASE AGPEAGLAAS AESGAERARE PAADITADAG AAIDVEPGAS AESATAAVAP ARHAESAATS PRAGNAPAGT PFAAAPPSHA APAEPPHRAF SAQRALSYMW REMLELRRDP VRATLALIGS LVLMCVIGIG ISLDVEDLTY AVLDRDQTEL SHDYALNLSG SRYFVERPPI ADYAALDRRM RDGELSLAIE IPPNFARDVE RGAPAQIGMW IDGAMPQRAE TIRGYAIGMH TMWLADKARH RLGVTLAPRA EVVTRYRYNP DVKSLPAMIP AVMPLLLLML PAMLTALAVV RERELGSILN LYVTPVTRTE FLIGKQVPYV VLAMLNFLLM TMLARIAFDV PVKGSFMTLL LAVLIFNVVA TGIGLLASTF TRSQVAAIVM TIIGTMIPTV QFAGLLTPLS SLEGTGRLIG LVYPATYMLS ISRGVFNKAL SLHELYSQFW PLAACVPVIL GATILLLKKQ ER
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