| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0585 |
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| Symbol | bsaO |
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| ID | 3694254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 777308 |
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| End bp | 780289 |
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| Gene Length | 2982 bp |
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| Protein Length | 993 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637730839 |
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| Product | Type III secretion system protein |
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| Protein accession | YP_335744 |
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| Protein GI | 76817937 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02511] type III secretion effector delivery regulator, TyeA family
[TIGR02516] type III secretion outer membrane pore, YscC/HrcC family
[TIGR02568] type III secretion regulator YopN/LcrE/InvE/MxiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00011059 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTATG CCGACACGGC CAGACGATAC GCAGCCGCGC TTGCCGCGTC GCTGCTGATG
ACGGGCGCGG CGTTCGCCGC GCCGACCGAC GCGGCGCCGC TCGCCGACGC GCCCGCGGCG
GCGAGCGCGA CGCCCGACGC GCGGGACGGC GACGCGTCGC GCGTGGCCGC GCCGCAGGAC
GACGAGCGCC ACTTCGTCGC GAACGACGCG AGCATCAGCG TGCTGCTCAA TGCGCTGTCG
GGCCGGCTGC ACAAGCCGAT CGTCGCGAGC GAGAAGGTGC GCCGCAAGCA CGTGACGGGC
GAGTTCGACC TCGCGCAGCC CCGCGCGCTG CTCGCGCGGC TCGGCGAATC GATGTCGCTG
CTCTGGTACG ACGACGGCGC GTCGATCTAC ATCTACGACA ACTCGGAGAT CAAGAACGCG
GTCGTCTCGA TGCGCCATGC GACGGTGCGC AACCTGCGCG ATTTCATCCG GCAGACGCGG
CTCTACGATC CGCGCTTTCC GGTGCGCGGC GACGACCTGA GCAACACGTT CTACGTGACG
GGCGCGCCCG TCTACGTGAA TCTCGTCGCC GCCGCCGCGC GCTATCTCGA CGAGGTGCGC
TCGAACGAGG CGAGCGACCG GCAGGTCGTG CGCGTCGTGC AGCTTCACAA CAGCTTCGTC
GTCGACCGCC AGTACACGCT GCGCGACAAG GAAGTCGACA TCCCGGGCAT GGCGACCGTG
CTCGGCCGCA TCTTCGGCCC GGCGCGGCCG GGCGCGCCGG CGGACTCGCC CGTCGCGGCG
GCCGACGCCA CGGCGCGCGG CGGCGCGGGC GGCGCGGCGG GCAAGCCGGC GTTCTCGCTT
GCCGATGCGT TTGCCCGCGC CGCTCGACGC CGGCAACGCG CCGGGCGGCG CGGGCTCGAC
GCATTCGACA AACCCGGCGA ACGCCGCGAG CCCGATGGGC GGCGCGGCGG GCGGCGTCGC
GCTGCCCGCG TCGGACGGCG TGCGCGCGGT GGCGTATCCG GACACCAACA GCGTGATCCT
CGTCGGCCGG CTCGACAAGG TGCAGGACAT GGAGGCGCTG ATCCGCTCGC TCGATGTCGA
GAAGCGGCAG ATCGAGCTGT CGCTGTGGAT CATCGACATC CGCAAGAGCC GGCTCGATCA
GCTCGGCATC GACTGGCAGG GTGCGCTCAA TGCGCCGGGT ATCGGCGTCG GCTTCAACAA
TCGCGGCGGC AACGTGACGA CGCTCGACGG CACCAGGTTC CTCGCATCGG TCGCGGCGCT
CAGCCAGACG GGCGACGCCA CCGTGATCTC GCGGCCGATC GTGCTCACGC AGGAGAACGT
GCCGGCGACG TTCGACAGCA ACCAGACGTT CTACGCGAAG CTGATCGGCG AGCGCACGGT
GCAGCTCGAT CACGTGACCT ACGGCACGCT CGTCAACGTG CTGCCGCGGC TCACGCGCGA
TGGGTCGCAG GTCGAGATGA TCGTCGACAT CGAGGACGGC AACACCGACG GCGCGACGAG
CGACGGCCAG ATCGTCATCG ACAACAACAC GATGCCGCTC GTGAACCGCA CCGAGATCAA
CACGGTCGCG CGCGTGCCGC ACGAGATGAG CCTGCTCATC GGCGGCAACA CGCGCGACGA
CGTCACGCGC CGCACGTTCC GGATTCCCGG GCTGGCCAGC ATTCCGCTGA TCGGCGGGCT
GTTTCGCGGG CATTCGGATC GGCACGAGCA GGTGGTGCGC GTGTTCCTGA TCCAGCCGAA
GCTGCTGCGC GCGGGCGCGG CCTGGCCCGA CGGCCAGCCG TGGGAATCGG GCGATCCGGC
GGACAACGCG ACGCTGCGCG CGACCGTGCA GATGCTCAAA CCCTACATGG ACGACAAGTC
ATGAGCTCGA TCATCGGCGG CGCGTCGGCC GCGCGGCGCG GCTTTTCGAT CGACGGCACG
GGGAGCGCGG CGAACCGGCT CGACGCGGAG CCGTCGCTCG ACGACGCGCC GCAGACGGGG
GCGGCGGGCG CGGCCGACGT GCAGGCGCAA CTCGCCGGCG TCGACGAGGA GGCCGCGAAC
GCCGCCGCGC AATTCGGCCG GTTCCGCGCG TCGGAGCGCA AGGGGCGGCG CAGCGACGAG
CTCGAACGGA TTCTCGACAC GGACGCCGAC GAGAAGCTCG ACGAGCTCGC CGCGCTGCTC
GGCGGCCGCG CGGCGCGCGG CCGCGCGGAC CTCGCGACGC TGCTGCGCGA CGCGCGCGAG
CGCTTTCGCG ACGAGAGCGA TCTGTTGCTC GCGCTGCGCG AGCTGCGCCG GCGGCGCCGG
CTCGACGGCG AATCCGTCGA CGCGCTCGAG CGCGCGATCG ACGAACTGCT CGCGGGCGAC
GGCGCCAAGC GGATCAAGGC GGGCATCAAC GCGGCGCTCA AGGCGAAGGT GTTCGGCGCG
CGGATGCAAC TCGATGCGCG CCGGCTGCGC GAGCTGTACC GGCAGTTCCT CGAGTTCGAC
GGCTCGCACC TCGTCATCTA CGAAGACTGG ATCGAGCAGT TCGGTGCGAG CCGCCGCAAG
CGGATTCTCG ACTACGTGAG CGCCGCGCTG TCGTACGACA TGCAGTCGCA CGATCCGAGC
TGCGGGTGCG CGGCCGAGTT CGGCCCGCTG CTCGGCACGC TGCATCGCGC GCGCATGCTC
GCGTCGGCCG ACGAGCAGTT CGTCGGCCGG CTGCTCGACG ACGCGCTCGC GCGCGATTGC
GGGCTCACCG AGGCGCGCGC GCTCGCGACG ATGCTGGGCG GCCTGCAACG GCCGTTCTCG
GTCGCCGACG TGCTGCTGGG CACGCTCGGC GATCTGCTCG AGCCGCTCGC GCCCGCCCGT
CGCTCGCAGT TGTTGCAGCT CGCGCTGCGC GCGTTCGCGG GCGTGCCGAT CGCGCTCTAC
GGCGACGCCG ACGCGCGCCG CGCGGCGCTC GGCGCGCTCG AGGAGCTGAT CGGCGCGACG
TATGCGCGCG AGCGGCGGCA GGCGCGCCCG CGCGCCGACT GA
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| Protein sequence | MMYADTARRY AAALAASLLM TGAAFAAPTD AAPLADAPAA ASATPDARDG DASRVAAPQD
DERHFVANDA SISVLLNALS GRLHKPIVAS EKVRRKHVTG EFDLAQPRAL LARLGESMSL
LWYDDGASIY IYDNSEIKNA VVSMRHATVR NLRDFIRQTR LYDPRFPVRG DDLSNTFYVT
GAPVYVNLVA AAARYLDEVR SNEASDRQVV RVVQLHNSFV VDRQYTLRDK EVDIPGMATV
LGRIFGPARP GAPADSPVAA ADATARGGAG GAAGKPAFSL ADAFARAARR RQRAGRRGLD
AFDKPGERRE PDGRRGGRRR AARVGRRARG GVSGHQQRDP RRPARQGAGH GGADPLARCR
EAADRAVAVD HRHPQEPARS ARHRLAGCAQ CAGYRRRLQQ SRRQRDDARR HQVPRIGRGA
QPDGRRHRDL AADRAHAGER AGDVRQQPDV LREADRRAHG AARSRDLRHA RQRAAAAHAR
WVAGRDDRRH RGRQHRRRDE RRPDRHRQQH DAAREPHRDQ HGRARAARDE PAHRRQHARR
RHAPHVPDSR AGQHSADRRA VSRAFGSARA GGARVPDPAE AAARGRGLAR RPAVGIGRSG
GQRDAARDRA DAQTLHGRQV MSSIIGGASA ARRGFSIDGT GSAANRLDAE PSLDDAPQTG
AAGAADVQAQ LAGVDEEAAN AAAQFGRFRA SERKGRRSDE LERILDTDAD EKLDELAALL
GGRAARGRAD LATLLRDARE RFRDESDLLL ALRELRRRRR LDGESVDALE RAIDELLAGD
GAKRIKAGIN AALKAKVFGA RMQLDARRLR ELYRQFLEFD GSHLVIYEDW IEQFGASRRK
RILDYVSAAL SYDMQSHDPS CGCAAEFGPL LGTLHRARML ASADEQFVGR LLDDALARDC
GLTEARALAT MLGGLQRPFS VADVLLGTLG DLLEPLAPAR RSQLLQLALR AFAGVPIALY
GDADARRAAL GALEELIGAT YARERRQARP RAD
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