Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_2230 |
Symbol | mrkD |
ID | 3688222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 2494042 |
End bp | 2495013 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637728686 |
Product | type-1 fimbrial protein, A subunit |
Protein accession | YP_333625 |
Protein GI | 76809781 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGATTGA AACGCGAACG GCGTGCGCGG CGCTCCCGCC TGCCCGCGGC GGCAGGCGGC CTGTGGCTTG TCGTTGCCGC GCTGCCGCCC GGCGCACGGG CAGCGACTTG CGAAGGCGAC AAGACACTCG TCACGCTTCC GGCCATCGCG GTCGCGGCCG ACGCGCCGGT GGGAACGGTG CTGTGGCGTC AGAAGGGGAT CGCTTTCAGC ACCTATTGCA CGTTGGGATG GTTCGACACC AGCAACATTT ATGTCTGGCG CGCCGACCTG CGCTCGGCGC TGCAGCCATA TGGGCTGACG TTCTGGCTGA CTTACGGAGG GCAGGGCGGC AACACCGCGC TGCAAATCAA GGAGCCGATG GTCGTCGATC TCGGCGGAAA GGCCGGTTAT GCGAGCGGCT CCGTCGACCT GGAACTGAGG AAGACGGGCG TGACGCCGGC GCAAGGCGTC GTCGGCGCGG CGGACATCCC CGCGTTCTAT CTCGATAGCA ATACGAACTA CAACAAAGGC TCGCACTACA TCCGCGGGCT GACCAACATT TCGTTCGTCT CCTATACCTG CGACATCGAT ACGGGGTCGC GCAGCATGAA CGTGCCGCTC GGCGACGTGC GCGTCGATCG CTTCAGCGGC ATCGGCTCCA CCTTCGCGGA TCGGAATTTC AGCATCGGCA TGACGTGCAC GCAGCCGGCC GGCACGTACG ATATCGCGCT GACGTTTTCC GCGACGGCGG ACAGCTCCGG CGCACCGGGC GTGCTCGCGA TCACGCAGGG GGCGTCTTCC GCGTCCGGAG TCGGCATTCA GTTGCTGATG AACGGCTCGC CGGTGACTTT CGGCGCCGTC CTCGACGCGG GCAGCGCGAC CGCGGGCGCG ACGCTGACGA TCCCGATGAC GGCACGCTAT TATCAGACCG GCAGTGTCGT GACGCCGGGC GCGGCGAACG GGATCGCAAC ATTCGCCGTC AGCTACAAAT GA
|
Protein sequence | MRLKRERRAR RSRLPAAAGG LWLVVAALPP GARAATCEGD KTLVTLPAIA VAADAPVGTV LWRQKGIAFS TYCTLGWFDT SNIYVWRADL RSALQPYGLT FWLTYGGQGG NTALQIKEPM VVDLGGKAGY ASGSVDLELR KTGVTPAQGV VGAADIPAFY LDSNTNYNKG SHYIRGLTNI SFVSYTCDID TGSRSMNVPL GDVRVDRFSG IGSTFADRNF SIGMTCTQPA GTYDIALTFS ATADSSGAPG VLAITQGASS ASGVGIQLLM NGSPVTFGAV LDAGSATAGA TLTIPMTARY YQTGSVVTPG AANGIATFAV SYK
|
| |