Gene BURPS1710b_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_1064 
SymbolamiC 
ID3689851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp1118054 
End bp1119598 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content69% 
IMG OID637727520 
ProductN-acetylmuramoyl-L-alanine amidase, AMIC precursor protein 
Protein accessionYP_332476 
Protein GI76810749 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.130481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATCA AACCGTTCCG CTCGATCGAA TCGGCGGCCA CCGCGACCCA TAACTGGCGG 
CGCCGGCAGA TCCTGCGCGC CGGCGCGTCG ACGCTCGTGC TCGGGCTCGC GCTGCCGCGT
CTCGCGCACG CGAGCTCGGT GCTCGGCGTG CGCGTGTGGC CCGCGCGCGA CTACACGCGC
GTGACGATCG AATCGGATCA GCCGCTGCAG AACACCCAGC AACTGCTGCA GGGGCCGGAC
CGGCTCGTCG TCGATCTGAA CGGCCTCGAG CTCGACCAGG CGCTGCGCGA CCTCGTCTCG
AAGATCGCGC CGAACGATCC GCAGATCCAG TCGGTGCGCG TCGGCCAGTA TCAGCCGCAC
GTGGTGCGGA TGGTGTTCGA CCTGAAGGGC TCGGTGAAGC CGCAGGTGTT CACGCTGCCG
CCCGTCGGCA CCTACAAGTA CCGGCTCGTG TTCGACCTGT ATCCGGCCGT CGCCCCCGAT
CCGCTGTCCG ATCTGATCGC GCAGACGGAG CGCAAGGAAC AGCAGTTGAA TGACACGCTG
CGCGCGCAGC AGGCGCAGCC GCCCACGGCC GCGCTCAACG GCCCGACCGC CGCGCCGCCC
GCCGCGACGG ACAACAGCGA TGCGTTCTTC CAGCGCTTCG CGCAGAACAA CCCGCCGGCC
GCGCATTCGG CGCGGCCGGC GCCCGCCAAT CCGCCCGTCG CGCAAGCGAG CCCGCCCGCC
GCACCGCCGC GGCCCGCGGT CAAGCCGCCG CCCGTCATCG CGCGCAGGAA CGACGACGAT
TCGGGCGACA CCGACACCTA CGCGTTCACC GCGCCGAAAT CCGGCCGCGG CACCGTGCGC
CTGCTGACGG TGGCGATCGA TCCGGGCCAC GGCGGCGAGG ATCCGGGCGC GATCGGCGGC
GGCGGCACGT ACGAAAAGCA CATCGCGCTC GACATCGCAA AGAAGCTGCG CGCGAAGATC
GACGCCGCGC CGAACATGCG CGCGATGATG ACGCGCGACG CCGATTTCTT CGTGCCGCTG
AACGTGCGCG TGCAGAAGGC GCGGCGCGTC GGCGCGGATC TGTTCGTGTC GATCCACGCG
GATGCGTTCA CGACGCCGTC GGCGCGCGGC TCGTCGGTGT TCGCGCTGTC GGACCACGGC
GCGTCGAGCG CGGCCGCGCG CTGGCTCGCG AACAAGGAGA ACTCCTCCGA TCTGATCGGC
GGGATCAACA TCAAGACGCA GGACGTCGCG GTGAACCGCG CGCTGTTCGA TATGTCGACG
ACCGCGCAGA TCCGCGATTC GCTGCGCTAC GGCAACTACG TGCTGCGCGA AGTCGGCGGC
ATCAACAAGC TGCACAAGGG CTCGGTCGAG CAGGCGGGGT TCGCGGTGCT CAAGGCGCCC
GATATTCCGT CGATCCTCGT CGAGACCGCG TTCATCAGCA ATCCGGACGA AGAGCGGCGC
CTGAACGACG ACGCGTATCG CGACCAGATG GCCGATGCGA TCTTCCGCGG AATCAAGCGC
TATTTCTCGG CGAACCCGCC GCTCGCGAAG AGCCGGATGA CGTAA
 
Protein sequence
MLIKPFRSIE SAATATHNWR RRQILRAGAS TLVLGLALPR LAHASSVLGV RVWPARDYTR 
VTIESDQPLQ NTQQLLQGPD RLVVDLNGLE LDQALRDLVS KIAPNDPQIQ SVRVGQYQPH
VVRMVFDLKG SVKPQVFTLP PVGTYKYRLV FDLYPAVAPD PLSDLIAQTE RKEQQLNDTL
RAQQAQPPTA ALNGPTAAPP AATDNSDAFF QRFAQNNPPA AHSARPAPAN PPVAQASPPA
APPRPAVKPP PVIARRNDDD SGDTDTYAFT APKSGRGTVR LLTVAIDPGH GGEDPGAIGG
GGTYEKHIAL DIAKKLRAKI DAAPNMRAMM TRDADFFVPL NVRVQKARRV GADLFVSIHA
DAFTTPSARG SSVFALSDHG ASSAAARWLA NKENSSDLIG GINIKTQDVA VNRALFDMST
TAQIRDSLRY GNYVLREVGG INKLHKGSVE QAGFAVLKAP DIPSILVETA FISNPDEERR
LNDDAYRDQM ADAIFRGIKR YFSANPPLAK SRMT