| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2076 |
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| Symbol | |
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| ID | 4905922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 2040377 |
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| End bp | 2041612 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640145181 |
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| Product | surface presentation of antigens protein SpaS |
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| Protein accession | YP_001076109 |
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| Protein GI | 126455636 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
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| TIGRFAM ID | [TIGR01404] type III secretion protein, YscU/HrpY family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAGA AAACCGAGAA GCCGACCGCG AAGAAGCTGC GCGACGCGGC GAAGAAGGGG
CAGACGTTCA AGGCGCGGGA CATCGTCGCG CTCATCGTGA TCGCCACGGG CGCGCTGGCC
GCGCCCGCGC TCGTCGATCT GACGCGCATC GCGGCCGAAT TCGTGCGGAT CGCGTCGACG
GGCGCGCAGC CGAACCCGGG TGCGTACGCA TTCGCGTGGG CGAAGCTGTT CCTGCGCATC
GCCGCGCCGT TCGTGCTGCT CTGCGCGGCG GCGGGCGCGC TGCCGTCGCT TGTGCAAAGC
CGCTTCACGC TCGCGGTCGA ATCGATCCGC TTCGATCTCA CCGCGCTCGA TCCGGTCAAG
GGAATGAAGC GGCTCTTCAG CTGGCGCTCG GCGAAGGACG CGGTGAAGGC GCTGCTCTAT
GTCGGCGTGT TCGCGCTCAC GGTGCGCGTG TTCGCCGATC TCTACCACGC CGACGTGTTC
GGGCTGTTCC GCGCGCGCCC GGCGCTGCTC GGCCACATGT GGATCGTGCT CACGGTGCGC
CTCGTGCTGC TGTTCCTGCT GTGCGCACTG CCCGTGCTGA TCCTCGACGC CGCCGTCGAA
TACTTCCTGT ACCACCGCGA ACTGAAGATG GACAAGCACG AGGTGAAGCA GGAATACAAG
GAGAGCGAGG GCAATCACGA GATCAAGAGC AAGCGGCGCG AGATTCATCA GGAACTGCTG
TCGGAGGAGA TCAAGGCGAA CGTCGAGCAG TCCGATTTCA TCGTCGCGAA CCCGACCCAC
ATCGCGATCG GCGTCTACGT GAATCCGGAC ATCGTGCCGA TTCCGTTCGT GTCGGTGCGC
GAGACCAACG CACGCGCGCT CGCCGTCATT CGGCATGCCG AAGCGTGCGG CGTGCCCGTC
GTGCGCAACG TCGCGCTCGC GCGCTCGATC TATCGCAACT CGCCGCGCCG CTACAGCTTC
GTGAGCCACG ACGACATCGA CGGCGTGATG CGCGTGCTGA TCTGGCTCGG CGAGGTCGAG
GCGGCCAATC GCGGCGGGCC GCCGCCCGAG ACGCGCGCGC CGACTTCGGC CGAGCCGCAA
GCGCGCGACG GCGTGGCCCC GCCGGGCGAC GCCTGCGCGG ACAACGCCTT TCCCGACGAC
GCCCCACCGG GCGCCGCCGC GCCGAACGCC GGTTCGCCGG ACAGCCCGGC GCCGGACGGC
GGCGCGCCGG CCCGAACGGG CGATCAAAAC GCTTGA
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| Protein sequence | MAEKTEKPTA KKLRDAAKKG QTFKARDIVA LIVIATGALA APALVDLTRI AAEFVRIAST
GAQPNPGAYA FAWAKLFLRI AAPFVLLCAA AGALPSLVQS RFTLAVESIR FDLTALDPVK
GMKRLFSWRS AKDAVKALLY VGVFALTVRV FADLYHADVF GLFRARPALL GHMWIVLTVR
LVLLFLLCAL PVLILDAAVE YFLYHRELKM DKHEVKQEYK ESEGNHEIKS KRREIHQELL
SEEIKANVEQ SDFIVANPTH IAIGVYVNPD IVPIPFVSVR ETNARALAVI RHAEACGVPV
VRNVALARSI YRNSPRRYSF VSHDDIDGVM RVLIWLGEVE AANRGGPPPE TRAPTSAEPQ
ARDGVAPPGD ACADNAFPDD APPGAAAPNA GSPDSPAPDG GAPARTGDQN A
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