| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1861 |
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| Symbol | soxD |
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| ID | 4904404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 1826965 |
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| End bp | 1827255 |
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| Gene Length | 291 bp |
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| Protein Length | 96 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640144967 |
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| Product | sarcosine oxidase, delta subunit |
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| Protein accession | YP_001075895 |
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| Protein GI | 126456797 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4311] Sarcosine oxidase delta subunit |
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| TIGRFAM ID | [TIGR01374] sarcosine oxidase, delta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.762279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCTGATCG AATGTCCGTG GTGCGGTCCG CGCGCCGAAT CCGAGTTCAG CTGCGGCGGC
GAAGCCGACA TCGCGCGCCC GCTCGATACC GACAAGCTGT CCGACCGCGA ATGGGGCGAC
TACGTGTTCA TGCGCAAGAA CCCGCGCGGC AAGCATCGCG AGCAGTGGCT GCACACGCAA
GGCTGCCGCC GCTGGTTCGT CGCGCAACGC GACACCGTCA CCTATGAATT CCAGGGCTAC
GAAACATTCG GCACGCCCGC CGCCCACGCA GCAAAGGACA CGAGCAAATG A
|
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| Protein sequence | MLIECPWCGP RAESEFSCGG EADIARPLDT DKLSDREWGD YVFMRKNPRG KHREQWLHTQ
GCRRWFVAQR DTVTYEFQGY ETFGTPAAHA AKDTSK
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