| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1072 |
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| Symbol | |
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| ID | 4904137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 1029673 |
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| End bp | 1030812 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640144178 |
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| Product | outer membrane porin |
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| Protein accession | YP_001075107 |
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| Protein GI | 126457262 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.645195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACATT CGGCCCGCCT GCTGGCCTGC GGCGCGCTCT GCGTCACCGC CGCGCATGCG
CACGCGCAAT CGAGCGTCAC GCTATACGGC ATCGTCGACA CCGGCATCGA ATTCGTTTCG
CACGCGAGCG CGAAGGGCGG TTCCGCGTGG CGCATGCCGG CCGTCACGGG CGAGCTGCCG
TCGCGCTGGG GCTTGCGCGG CGTCGAGGAT CTCGGCGGCG GCTATCGCGC GCTCTTCGCG
CTCGAAAGCG GCTTCAACCT GCGCGGCGGC GAGCTCGGCC AGGGCGGGCG ACTGTTCGGG
CGTCAGGCAT ACGTGGGCCT GCGCGCGCCG TTCGGCACGC TCGCGTTCGG CCGGCAATAC
ATGATGACTT ATGTCGCGCT GCAGGGCGCG GACATCATCG GCCCCGACAT CTATGGGCTC
GGCTCGCTCG ACGCTTACAT CCCGAACGGC CGCGCGGACA ACGCGGTGAC CTATGTCGGC
AGCTATCGCG GCGTGACGCT CGGCGCCGGC TATTCGTTCG GCCGCGACTC GGCAGGCACC
GGCAATTCGC CGGGGCAGGG CACGTGCGTC GGCTCGGTGC CGGGGCGCGC GGTCGAATGC
CGGAGCGGGT CGGCGATGCT GAAGTACGAC GCCGAGCGCT TCGGCGTGGC TGCGTCGTAC
GAAGAGCAGC GCGGCGGCGC GAACGCGGCG GCGAACTTCT TCGACGGTGC CGCGCCGATG
CCGATCGCAA GCAGTGCGGA CAAGGACACG CGCGCGCACG TGAGCGCGTA CGCGAACGCG
GGGCCGGTCA AGCTCGGCGC GGGCTGGATC GGCCGGCGCG TGTCGACCGA CGCGCCCGCC
GCGCCCGACG TGCGCACCGA TCTGTTCTTC GTCGGCGCCG CCTATCGCGC GACGCCGTTC
GTGACGATCG ACGGCGAAGC CTACCGGATC GTCGATGCGC GGCACGACGC GCGCGCGACG
ATGGCGACGC TGCGCGCGAG CTTCTCGCTG TCGAAGCGCA CCGCCGTCTA TGCGCAGACC
GCGTACCTAT GGAACAGCGC GCACGCGCGC TATTCGGTGA GCGGCGGCGG AGGCGGCACG
ATGCCCGCGG CCGGCGTCGG CCAGCTCGGC GCGATGGTCG GCGTTCGGCA CATGTTCTGA
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| Protein sequence | MRHSARLLAC GALCVTAAHA HAQSSVTLYG IVDTGIEFVS HASAKGGSAW RMPAVTGELP
SRWGLRGVED LGGGYRALFA LESGFNLRGG ELGQGGRLFG RQAYVGLRAP FGTLAFGRQY
MMTYVALQGA DIIGPDIYGL GSLDAYIPNG RADNAVTYVG SYRGVTLGAG YSFGRDSAGT
GNSPGQGTCV GSVPGRAVEC RSGSAMLKYD AERFGVAASY EEQRGGANAA ANFFDGAAPM
PIASSADKDT RAHVSAYANA GPVKLGAGWI GRRVSTDAPA APDVRTDLFF VGAAYRATPF
VTIDGEAYRI VDARHDARAT MATLRASFSL SKRTAVYAQT AYLWNSAHAR YSVSGGGGGT
MPAAGVGQLG AMVGVRHMF
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