Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A0791 |
Symbol | |
ID | 4905835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 790555 |
End bp | 792339 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640143897 |
Product | putative ABC transporter, ATP-binding protein |
Protein accession | YP_001074827 |
Protein GI | 126456527 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.387724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCCT GGCTGAAGCG ATGGCGATGC TTGCCGGCCG ACACGCGGCG CAGCCTGGTT CGCGGCGTCG GCTGGGCGGT GGCCGCCGCG CTGCTCGACG GCCTGTGCGG CGTGCTGCTG GTGCCGCTCA TTCGTGCGTG GTTCGCGGGC GGCGCGCTGC TGCACTGGGC GGCGGCGCTC ATCGCGCTGA CGCTCGGCCA TGCGCTCGTG CTGTACGCCG CGCAGCTCGG CGGCTATCGC GCGGGCGGCG CGCTCGCGCT CGGGCTCGTC GATCGCCTGG TGCGCCATCT GCCGCGCATC GCCGCGCCGC AGACCGTGCG CGATAGCGAT CCGGAGGGCC TGCTGCGCGG CCCGGTGATG CAGGCGATGG GCATTCCCGC GCATCTGCTC GGGCCGCTGA TCGGCGCGGT GGTCACGCCG CTCGCGGTGG TCGCGGGGCT CGCGGCGATC GATTGGCGGA TCGCGCTGTG TCTCGCCGCC GCGGCTGCGC TGCTGTTCGC GCTGCTCAAC CGCAGCGGCG CGCGCACGCT GGCGCTCGAA GAGGCGCGCG CGGCGGGCGA GCGCGACCTG GCCGAGCAGC TTCAGGCGTT CGCCGCGCAT CAGGGGCTGC TGCGTTTCGC CGGGCGGGAC GGCAGCGGGC GCGCGGCGCT GCAGCGCGCG CTCGACGAGC GGCATCGCCG CGCCCGCGCA CTGATGCGGC GTTCGCTGCC GCTCGAGCTC GGTTTCGCGG GAGCGGTGCA GGCGGTGTTC GTCGCGATGC TGGTGGGCGG CGCGGCGGCG GTCGCGGCCG GCCGGCTCGA CCCGGCGACC GTCGTCGCGG TGCTCGTGCT GCTCGTGCGC TTCATCGAGC CGCTCGCGCA GCTGACGCAG CTCGACCAGG CGCTGCGCGG CGGCTGGCGC GCGCTCGACG CGGTGCTGAC GGTGCTGCAC GCACCGCGCT TCGAAAGCCC CGAGCGCGGC CTGCGGCCGC AGGACGCGAG CGTCGCGGCG GTGCGGGTCG GCTATCGGTC GGAGACGGGC GCGACACTGC TCGACGACGT CGACCTGCAC TGCCCGGCGG GCGGCTTCGT CGCGATCGTC GGGCCGACGG GCGCGGGCAA GAGCACGCTG CTCGGCCTGC TCGCGCGGCT CGACGATCCG TCGAGCGGCC GCGTGCTGTT CGGCAACGTC GATTTGCGGC GCTTGAGCGA GACGACGCTC GCCGGCGCGC GCACCGTCGT GTTCCAGCAT AGCGGCCTGT TTCGCGGCAG CCTCGGATGG AATCTGCGGA TGGGCCGCCC CGATGCGAGC GGCGCGGCGC TCGATGCGGT GCTGGACGCG CTCGGGCTGT CGCGCGACGT CGAGCGTTTG CCGCACGGGC TCGACACCGA CGTCGGGCCG GGCGGTCAAT TGCTGTCGGG CGGGCAGCGC CAGCGCGCGT GCATCGCGCG CGGGCTGCTC GCGAAGGCGC CGCTGCTGCT GCTCGACGAG CCGACCGCGA GCCTCGACGA ACTGAGCGCG CGGCGCGTGC GGGACTGCCT CGTCGCGATG CGCGGGCAGC GCACGCGCAT CGTCGTCACC CATCATCCGG CGCTCGCGCG CGCCGCCGAC GAGATCGTCG TGCTCGAGGC CGGCCGCGTG CGGGCGCGCG GCACGCACGC GCAGCTCGTC GCGGCCGATC CGTGGTATGC GGAATTCGCC CGCGCCGAAA GCGAGTGCGA ACGCGAGCCC GAAGTCGAGA CGCCGGTCAC GGCCACAGCC GGTATTTCGG CGCCGGCGCG CGGGGCGGAT GCCGGACATC GATAG
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Protein sequence | MTAWLKRWRC LPADTRRSLV RGVGWAVAAA LLDGLCGVLL VPLIRAWFAG GALLHWAAAL IALTLGHALV LYAAQLGGYR AGGALALGLV DRLVRHLPRI AAPQTVRDSD PEGLLRGPVM QAMGIPAHLL GPLIGAVVTP LAVVAGLAAI DWRIALCLAA AAALLFALLN RSGARTLALE EARAAGERDL AEQLQAFAAH QGLLRFAGRD GSGRAALQRA LDERHRRARA LMRRSLPLEL GFAGAVQAVF VAMLVGGAAA VAAGRLDPAT VVAVLVLLVR FIEPLAQLTQ LDQALRGGWR ALDAVLTVLH APRFESPERG LRPQDASVAA VRVGYRSETG ATLLDDVDLH CPAGGFVAIV GPTGAGKSTL LGLLARLDDP SSGRVLFGNV DLRRLSETTL AGARTVVFQH SGLFRGSLGW NLRMGRPDAS GAALDAVLDA LGLSRDVERL PHGLDTDVGP GGQLLSGGQR QRACIARGLL AKAPLLLLDE PTASLDELSA RRVRDCLVAM RGQRTRIVVT HHPALARAAD EIVVLEAGRV RARGTHAQLV AADPWYAEFA RAESECEREP EVETPVTATA GISAPARGAD AGHR
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