| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3946 |
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| Symbol | |
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| ID | 4901237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 3852362 |
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| End bp | 3853183 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640137172 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001068166 |
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| Protein GI | 126455443 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.292051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAAG CCATCGCCAC CGATCTCGAC GGAACCCTGC TCAATAGCGA CCACCAGCTC
GATCCTTATA CGATCGACAC CGTGCGGCGG CTCGCGGACG GCGGCGTGCC CTTCGTGATC
GCGACGGGGC GCCACTATGC GGATGTCGCG GGTATTCGCG ACGTGCTCGG CATCCGTCCT
TACCTGATCA CGTCGAACGG CGCGCGCGTG CACGGGCCGG ACGACACGCG GATCCACGCG
CAGGACGTGC CCGCCGACGC GGTGCGGCAA CTGGTGCGGC CCGAGCTCGT CGGCACGCAT
GGCCGGGTGA TCGTCAATCT GTTCACGAAC GACGGCTGGC TGATCGATCG CGATGCGCCG
CAACTGCTCG CATTCCATCA GGATTCCGGA TTTCGCTACG AAATCGTCGA TATGCTGGCG
CACGACGGCG CGGACATTGC GAAAGTGCTG TACATCGGCG AGCCCGAGGA TCTGGCCGTC
GTCTCGGGCA ATCTCGCGCG CCGGTTCGGC GACGCGCTGT ACGTCACGTA TTCGCTGCCC
GATTGCCTCG AGGTGATGAC GGCGAATGTA TCGAAGGGGC GCGCGCTGCG CGTCGTGCTC
GAGCGGCTCG GCGTCGATCC CGCCCACTGC GTGGCGTTCG GCGACAACAT GAACGATATC
GACCTGCTCG AGACGGCCGG GTATCCGTTC ATGATGAACA ACGCGAATCC CGACCTCGCC
TTGCGCCTGC CGAAGGTGCC GCGGATCGGC AACAACTTCG AAGCGGGCGT CGCGCGCCAT
CTGCGCGCGC TGTTCGCGCT CGAGGATTCC ATCGCGCACT GA
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| Protein sequence | MYKAIATDLD GTLLNSDHQL DPYTIDTVRR LADGGVPFVI ATGRHYADVA GIRDVLGIRP
YLITSNGARV HGPDDTRIHA QDVPADAVRQ LVRPELVGTH GRVIVNLFTN DGWLIDRDAP
QLLAFHQDSG FRYEIVDMLA HDGADIAKVL YIGEPEDLAV VSGNLARRFG DALYVTYSLP
DCLEVMTANV SKGRALRVVL ERLGVDPAHC VAFGDNMNDI DLLETAGYPF MMNNANPDLA
LRLPKVPRIG NNFEAGVARH LRALFALEDS IAH
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