Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_1884 |
Symbol | |
ID | 4900247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 1839883 |
End bp | 1840935 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 640135114 |
Product | putative pilus assembly protein CpaB |
Protein accession | YP_001066149 |
Protein GI | 126452162 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.222645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCATT TTCTCAAGCT CGCCGGCCTG ATGCTCGTCG CGGTGGTCGG CGCGTTTCTG TTCCGTGCGC TGTACGTCGC GGCGTCGCAG CCGCGCCCGG CCGCGCCGCC GCAGCAGGTG CGCGTGCGTG TGGCGGCCGC CGATCTGCCG GCGGGCCTGC TGCTGCGCGA TGCCGATCTC GGCTGGAAGA CGATGGCGCG CTCCGCCGCG CCCGCCGGCG CGTTGATCGA GGGCGATGCG CGCGGCGACG GCAAAGCCGC CGGCGCGGCG AACGACGCGA GCGCCGCCGC GGCCGGCGAG CCGAAGACGG ACCTCAAGGG CGACCTGCTG CGTCATCCGG TGCGCGCGGG CGCGCCGCTC GGGCCGGCCG ACGTGATTTC GCCGAGCGCG CCGGGCTTTC TCGCGGCCGC GCTCAAGCCC GGCATGCGGG CGATTTCGGT CGCGATCGAC GACGTGTCCG GCAACGCCGG CCTCATCGAG CCGGGCGACT ACGTCGACGT GCTGCTCACG CAGCAACTCG CCGCGCCGGG CGGCACGCCG GCCGATCCGC AGCGCGCGGT CGAATCGGAG ACGATCGCCG CGCGGCTGCG CGTGCTCGCC GTCGGCTCCG CATTCCAGCG GCCCAAGGAC GACGCCGCGC AGCCGAACAC CCGCGCGCGC ACGGTGACGT TCGAGGTGAG TTCGCGCGAC GCGCAGGTGA TCACGGTCGG CGCGCATCTG GGCGCGCTGT CGCTCGCGCT GCGCAGCTTT GCAACGAGCG ATCGCGGCGC CGTCGGCACG GCGCCCGCGG AGCCGCCCGC GCCGCCCGTA TGGGCGGGCG ACGTGTCGCG CGCGCTGCGT GCGCAGGCGC CGGCCGAGGC GCCCGCGCAG CCGCGCCGCA TGGGCGCCGC GCGCGCGCAG GCCGAGCGTC GCGTGATCGT CTATCGCGGC TCGAAGCAGG ACGATGCGGC GAGCGCCGGT GCGCCGCTGC CGGGCGGTGT GCCGCCGATT CCGACGCTGC CGTCGCTGCC GGGAGCGGCC GCGCCGCCCG CCGGCGCGCG GCCCGCGGCG TGA
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Protein sequence | MSHFLKLAGL MLVAVVGAFL FRALYVAASQ PRPAAPPQQV RVRVAAADLP AGLLLRDADL GWKTMARSAA PAGALIEGDA RGDGKAAGAA NDASAAAAGE PKTDLKGDLL RHPVRAGAPL GPADVISPSA PGFLAAALKP GMRAISVAID DVSGNAGLIE PGDYVDVLLT QQLAAPGGTP ADPQRAVESE TIAARLRVLA VGSAFQRPKD DAAQPNTRAR TVTFEVSSRD AQVITVGAHL GALSLALRSF ATSDRGAVGT APAEPPAPPV WAGDVSRALR AQAPAEAPAQ PRRMGAARAQ AERRVIVYRG SKQDDAASAG APLPGGVPPI PTLPSLPGAA APPAGARPAA
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