| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1960 |
|---|
| Symbol | |
|---|
| ID | 3844626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 2385475 |
|---|
| End bp | 2387085 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637839261 |
|---|
| Product | copper tolerance protein |
|---|
| Protein accession | YP_440154 |
|---|
| Protein GI | 83717855 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGC GCTTCGTTTC CCTCCGGATC TGCGCGGCGG CGGCAGTGCT CGCGTTCGCC
GCGGGCTGCA CGACGTTTTC GCGGGACGGC GGCTTCGGCG CCGTGTCGAC CGTGGCCACC
GAGCGGCTCG GCAAGGACGC GGTGCAGGTG AAGACCGACG CCGATCGCGA CGCGCTCGCG
CGCCGCACGC AGGCGCTGCT GTCGAAGCCG CTCGGCATCG ACGACGCGGT CCAGATCGCA
TTGCTGAACA ACCGCGGCCT GCAGGCTTCG TACGCGGAAC TCGGCCTGTC CGAGGCCGAT
CTCGTGCAGG CGGGGCGGCT GCCGAATCCG GGCTTCACGT TCAGCCGCAC GCGTTCGAGC
AATGATCTGA GCATCGGCCG GACGTTTTCG ATGAACGTCC TGAGCATCCT GACGCTGCCG
CTCGCGACGA AGATCGAGGG CCGGCGCTTC GAGCAGACGA AGCTCGAGAC CGCCGACGCG
ATGCTGAAGG TCGCGGCCGA CGCGCGCCGC GCCTACGTCG AAGCGGTCGC GGCCGCGCAG
GCGGCGACTT ACGCGGAGCA GGTGAAGGAT TCGGCGGACG CCGGCGCGGA GCTCGCGCGC
CGGATGCGGC GGGCCGGCAA CTTCAGCCGG CTCGACTATG CGCGCGAGCA GGCGTTCTAC
GCGGACGCCG TCGCGCAACT CGCGAACGCG CGGCTACGCG CGCTCGCCGC GCGCGAAAAG
CTCACGCGCG CGATGGGCCT ATGGGGCGCG TCGACCGGAT ACAAGCTGCC CGACCGCCTG
CCCGAACTGC CCGCCGAACG GCCGCGGCTA GACGACGTCG AGCGCTACGC GATGGACCAT
CGCCTCGACA TCCGGGCGGC GAAGCTGAGG ACGCAGGGCG TTGCGAAGTC GCTCGGCCTC
ACTCAGGCGA CGCGCTTCGT CAACGCGCTC GAAGTCGGCT ACCTCGACAA CTACGAGACC
GACAAGGGGC GCGAGCACGG CTACGAGATC AGCGTCGAGA TTCCGCTGTT CGACTGGGGC
GGCGCGAAGG TCGCGCGGGC GAAGGCGACT TACCTGCAGT CGGCGAACCG GCTCGCGCAG
ACGGCGATCG ACGCGCGCTC CGAGGTGCGC GAGTCGTACG CGGCTTACGT GACGCGCTAC
GACATCGCGA AGCACTATCG CGACGAGGTC GTGCCGCTGC GCAAGACGAT CTCCGACGAG
ATGCTGCTGC GCTACAACGG GATGCTCGTC AGTGTGTTCG AGCTGCTGGC CGATGCGCGC
GATCAGGTCG GCGCGGTGAA CGGCTATCTC GATGCGCTGA AGGACTACTG GCTCGCGCAG
GCCGATCTGC AGCAGGCAAT GGGCGGGCGC CTGCCGCGCA GCGGGCCGGC GGCGGGCGAG
CCGCAAGCGG CCGTGCCGGC GTCGGCATCG GCGTCGGCCT CGGCCGCTGC CGACGCGTCC
GTGGTGTCCG CCGCATCGGC GTCGCCGGCC GCATCCGCGC CGGCGGGCGC TTCCGCAGCC
GCTTCCACGG ACACATCGCC CGCCGCGATC GCGGCCAAAG TCCCCACACA CGCTCACGGG
CCCGCTCCCG CTTCCTCGCC CGCGTCATTC ACGAATTCGG AAGGTCAATG A
|
|---|
| Protein sequence | MKTRFVSLRI CAAAAVLAFA AGCTTFSRDG GFGAVSTVAT ERLGKDAVQV KTDADRDALA
RRTQALLSKP LGIDDAVQIA LLNNRGLQAS YAELGLSEAD LVQAGRLPNP GFTFSRTRSS
NDLSIGRTFS MNVLSILTLP LATKIEGRRF EQTKLETADA MLKVAADARR AYVEAVAAAQ
AATYAEQVKD SADAGAELAR RMRRAGNFSR LDYAREQAFY ADAVAQLANA RLRALAAREK
LTRAMGLWGA STGYKLPDRL PELPAERPRL DDVERYAMDH RLDIRAAKLR TQGVAKSLGL
TQATRFVNAL EVGYLDNYET DKGREHGYEI SVEIPLFDWG GAKVARAKAT YLQSANRLAQ
TAIDARSEVR ESYAAYVTRY DIAKHYRDEV VPLRKTISDE MLLRYNGMLV SVFELLADAR
DQVGAVNGYL DALKDYWLAQ ADLQQAMGGR LPRSGPAAGE PQAAVPASAS ASASAAADAS
VVSAASASPA ASAPAGASAA ASTDTSPAAI AAKVPTHAHG PAPASSPASF TNSEGQ
|
|---|
| |