| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2242 |
|---|
| Symbol | hflC |
|---|
| ID | 3848462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 2520244 |
|---|
| End bp | 2521143 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637841911 |
|---|
| Product | HflC protein |
|---|
| Protein accession | YP_442763 |
|---|
| Protein GI | 83721589 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | [TIGR01932] HflC protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.564384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGAA TCATCGCGCT CGTCGTAGCG ATCGTCATCG TCGTGCTGGC GGCCTCGTCG
ACGGTGCTCG TCGTCGATCC GCGCCACACG GCCGTGCTGT CTTCCCGCGA CGGCGCCGCG
CCGAAGCTCG CCGGCCCCGG CCTGCATTTC AAGTTGCCGC AGCCGCTGCA GACGGCGACG
CTCGTCGACG TCCGCGTGCA GACGCTCGAC TCCGCCGATC CGCTGAGCCT CGCGACCCAG
GACAAGAGCG ACGTGCTCGT GAGTCCCGTC GTCAAGTACC GGATCACCGA CGTGCTCAAG
TACTACAGGG AGACGGGCGG TGCGCCGCGC AACGAGGCTG AACGCCTGTC GGCGGCGGTC
AGGGGCGCGC TCGGCGCCGC GTTTGCGAAG CGCGATCTCG ACGACGCGCT CGGCAGCCAG
CGCGCGATCG CCGACGACGC GAAGCTCGCG CTGCAGGCCG GCGCAACGTC GCTCGGCATC
GACATCGTCG ACGTGCAACT GGCGCGCGTC GACTTGCCCG CCGCGCAGGC GGACGGCGCG
TATCAGCGGA TGACGGCCGA GTTGCAGCGC GCGGCCGAGC GCGAGCGCGC GGAAGGCGCG
GCGCAGGCGG AAGAGATCAA GGCGGACGCG GCACGGCAGC AGCAGACGAT CCTCGCGGAG
GGTTACAAGT CCGCGCAGTC GATCAAGGGC GAGGGCGACG CGAAGGCCGC GTCGATCGCC
GCCGACGCGT TCGGCCGCGA TCCGCAGTTC TATCAGTTCT ACGCGAGCCT GCAGGCGTAT
CGGAACAGCT TCAAGCCGAA CGACGTGATC GTCGTCGATC CGGACAGCGA GTTCTTCCGC
TTCATGCGCG GCCCGACGGG CGGCGCCGCA GCGCCGGCTG CCGCTGCCCG TAACCGTTGA
|
|---|
| Protein sequence | MNRIIALVVA IVIVVLAASS TVLVVDPRHT AVLSSRDGAA PKLAGPGLHF KLPQPLQTAT
LVDVRVQTLD SADPLSLATQ DKSDVLVSPV VKYRITDVLK YYRETGGAPR NEAERLSAAV
RGALGAAFAK RDLDDALGSQ RAIADDAKLA LQAGATSLGI DIVDVQLARV DLPAAQADGA
YQRMTAELQR AAERERAEGA AQAEEIKADA ARQQQTILAE GYKSAQSIKG EGDAKAASIA
ADAFGRDPQF YQFYASLQAY RNSFKPNDVI VVDPDSEFFR FMRGPTGGAA APAAAARNR
|
|---|
| |