| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0650 |
|---|
| Symbol | |
|---|
| ID | 3850039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 747937 |
|---|
| End bp | 749724 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637840323 |
|---|
| Product | O-antigen polymerase family protein |
|---|
| Protein accession | YP_441206 |
|---|
| Protein GI | 83721181 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCCT CTTTTCTGCG TTCTTTATCG CTGATCGCGC TCGCCGTCGC ACTGATCCTG
CCGTACGCGA TCACGAATCA TACTTACCCG ATCCCGACCT TCTATTCCGA ATTCGCTGCG
TTCGCGTTGT ATTGGGTGCT CGGCGCGAGC GTCGTCCTGC TCGTGAAAGC CGAGCGCGCC
CGACAACCGT TCGCGGCGCC GATGGCGCTC GTTGCGCCGC TCGGATTCGG CGCGGTATTG
CTCGCGCAGA TCGCGCTGCT GCCGCTGCGC CTGCCTTCGA TGAACTGGCT CGCGATGGGC
TACCTGCTCG GCGCGCTCGT CGCGATGCAG GCCGGCTATG CGCTCGCGCG CGCGAACATG
GTCGACGTGG TCGCGCGAAT GATCGCGGGC GCGACGATCA TCGGCGGCGT CGTCGCGGTC
GCGTGCCAGT TCGTGCAACT GTTCCATCTG GAGACGATGT TCTCGCCGTT CGTCGTGTCG
TACGGTGTGA CGGTCGACCG CCGTCCGTAC GGCAACATGG CGCAGGCCAA CCATCTCGCG
ACCTATATCG CGTTCGCGCT CGCGGGCGCG CTCTATCTCG TGCAGACGCG GCGGATGCCG
GCGCTCGCGT GGGCGGCGCT GTCGGTGCTC TTGTCCGTCG GGCTCGCGCT CACCGTGTCG
CGGGGGCCAT GGCTGCAGGT CGGCGTGATG GTCGTCGCCG GCTTCTGGAT GGCGTTCGCG
CAGACGCGGC GCGATCCGGC CGCGCGCCGC GCGCGCGCAT GGGTGATTCC CGTCGTGCTC
GGCGCGCTGT TCGTCGCGGT CAACGTCGCG GTGCGCTGGG CGAATGCCCA CTACCATCTC
GGTCTCGCGG AATCGGCTGC GGAGCGCATG CGCGACGCCG GCCAGATCGC GCCGCGTCTC
GCGCTCTGGA AGTACGGCCT CACGATGTTC CGCGAGCATC CGCTGCTCGG CGTCGGCTGG
GGCGAATTCC CGATTCATCA GTTCGAGCTC GTGCGCAGGC TGGGCGGCGT CGAGATCGCG
AACAACTCAC ACGACATCTT CATCGATCTG CTCGCGAAAT CCGGCTTGCT CGGTCTCGGC
GTGCTGTTCG TCGCGCTCGT CGCGTGGTTC GTGCGTGCGC TGCGCGCGCC GCATGCCGAG
AGCCGCGTGT TCGGCTTCGC GCTCGTCGGT ATCGTGTTGA TGCACGCGCT CGTCGAGTAT
CCGCAGCAGT ACACGTTTTT CCTGCTGCCT GTGATGTTCG TGATCGGCCT GCTCGAGACG
AAGCCGCTGC GCATGCTGCC GGGCCGTGCG GCGTTCGCGC TGTTCGCGGC GCTGTCGGTG
GCGGGGCTCG CGTCGCTGTA TCCGGTGCTG CGCGACTACC AGCGGGCCGA AGTGTTGTAT
TACGGCACGA ATCCGGCCGA GCAATACCGC GAGCAACCGT CGTTCCTGTT CGGTGCTTGG
GGCGATTACG GCGCGGCAAC GCTGCTCGCG ATTTCGCGCG ACAACTTGCA GGCGAAGCTC
GCCGCGCACG AGCGCGCGAT CGCGCTGTTG CCCGGCGAGA CGGTGCTGCG CCGCTATGCG
GTGTTGCAGG CGCTCGACGG CCGCGAGGCC GACGCGCTCG ATACGGTCGA GCGGTTGCGC
GTGTTCGCGG AAGAGCTGCA CGACTGGCCG GTGCAACTTG CCGCGCTGTA CAAGCTGCTC
GACGAGCAGC CGTCGCTGAA GTCGTTCAAG ACGGCGCTCG TCGCGAAGTA CGGAACGCCG
GCGGCGAACC TGTCCGCCGA CGACGAGGAA GACGACAGCG ACGAATGA
|
|---|
| Protein sequence | MPSSFLRSLS LIALAVALIL PYAITNHTYP IPTFYSEFAA FALYWVLGAS VVLLVKAERA
RQPFAAPMAL VAPLGFGAVL LAQIALLPLR LPSMNWLAMG YLLGALVAMQ AGYALARANM
VDVVARMIAG ATIIGGVVAV ACQFVQLFHL ETMFSPFVVS YGVTVDRRPY GNMAQANHLA
TYIAFALAGA LYLVQTRRMP ALAWAALSVL LSVGLALTVS RGPWLQVGVM VVAGFWMAFA
QTRRDPAARR ARAWVIPVVL GALFVAVNVA VRWANAHYHL GLAESAAERM RDAGQIAPRL
ALWKYGLTMF REHPLLGVGW GEFPIHQFEL VRRLGGVEIA NNSHDIFIDL LAKSGLLGLG
VLFVALVAWF VRALRAPHAE SRVFGFALVG IVLMHALVEY PQQYTFFLLP VMFVIGLLET
KPLRMLPGRA AFALFAALSV AGLASLYPVL RDYQRAEVLY YGTNPAEQYR EQPSFLFGAW
GDYGAATLLA ISRDNLQAKL AAHERAIALL PGETVLRRYA VLQALDGREA DALDTVERLR
VFAEELHDWP VQLAALYKLL DEQPSLKSFK TALVAKYGTP AANLSADDEE DDSDE
|
|---|
| |