| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1557 |
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| Symbol | |
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| ID | 4680801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | - |
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| Start bp | 1530973 |
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| End bp | 1531752 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639845824 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_992883 |
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| Protein GI | 121601505 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000396998 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCGTT CGATCAATCT GGAGGGCAAG GTCGCGCTGA TCACGGGCGC GTCGAGCGGG
CTCGGGCAGC GTTTCGCGCA GGTGCTGTCG CAGGCGGGCG CGAAGGTCGT GCTCGCGAGC
CGGCGCGTCG AGCGCCTGAA GGAGCTGCGC GCGGAAATCG AGGCGGCGGG CGGCGCCGCG
CATGTGGTGT CGCTCGACGT CACCGATTAT CAGAGCATCC GGGCGGCTGT TGCGCACGCC
GAAACGGAAG CGGGCACGAT AGACATTCTC GTCAACAATT CGGGCGTGTC GACGATGCAG
AAGCTCGTCG ACGTGAGCCC CGCCGATTTC GAGTACGTGT TCGATACGAA CACGCGCGGC
GCGTTCTTCG TCGCGCAGGA AGTCGCCAAG CGAATGATGA TGCGCGCGGG CAGCGGCAAC
GCGAAGCCGG CCTGCCGGAT CATCAACATC GCGTCGGTCG CCGGGCTGCG GCCGTTCTCG
CAGATCGGCC TCTATGCGAT GAGCAAGGCG GCCGTCGTCC ACATGACGCG GGCGATGGCG
CTCGAATGGG GCCGCCACGG CATCAACGTC AACGCGATCT GCCCCGGCTA CATCGACACC
GAGATCAATC ACTATCTATG GGAAACCGAG CAGGGCCAGA AGCTGCAGTC GATGCTGCCG
CGCCGGCGCG TCGGCAAGCC GCAGGATCTC GACGGGCTGC TGCTGCTGCT CGCCGCCGAC
GAGTCGCAGT TCATCAACGG CTCGATCGTG TCGGCCGACG ACGGCCTCGG GCTCGCGTGA
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| Protein sequence | MGRSINLEGK VALITGASSG LGQRFAQVLS QAGAKVVLAS RRVERLKELR AEIEAAGGAA
HVVSLDVTDY QSIRAAVAHA ETEAGTIDIL VNNSGVSTMQ KLVDVSPADF EYVFDTNTRG
AFFVAQEVAK RMMMRAGSGN AKPACRIINI ASVAGLRPFS QIGLYAMSKA AVVHMTRAMA
LEWGRHGINV NAICPGYIDT EINHYLWETE QGQKLQSMLP RRRVGKPQDL DGLLLLLAAD
ESQFINGSIV SADDGLGLA
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