| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_A0624 |
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| Symbol | |
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| ID | 4891283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei NCTC 10247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009079 |
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| Strand | - |
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| Start bp | 580708 |
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| End bp | 581802 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640146901 |
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| Product | putative type III secretion inner membrane protein SctT |
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| Protein accession | YP_001077826 |
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| Protein GI | 126445934 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.271197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACCT ACGACATCTT TGCGCTGCAG CACCTGGGCG ACGAATTCAT CCGCTTCATC
GTGCTGCTCG CGCTGTCGAG CGAGCGGCTG CTCGTGCTGA TGGCGATCCT GCCGGCGACC
GCCGACAACG TGATGAAAGG CCCGATGCGC AGCGGCGCGG CGGCGGTGTG GTGCCTGTTC
GTCGCGGGCG GACAGCAGGC GCTGATTCCG CAGCTCCACG GCGCGTTCCT GATGATCGCC
TGCGTGAAGG AGGCCGTGAT CGGGCTCGTG CTCGGCATCG CGGCATCGAC GGTATTCTGG
GCCGCCGAGG CGATCGGCAC GTATCTCGAC GACGTCGCCG GCTTCAACAA CGTGCAGATG
CAGAACCCGA GCTCGGGCGC GCAGACCTCG CTGATGGCGA CGCTGTTCGG GCAACTGACG
ATCGCGTCGT TCTGGCTGCT GGGCGGCATG ACGTTCCTGC TCGGCGCGCT GTACGAATCG
TTCGCCTGGT GGCCGTTCGG ATCGTTCGAT CCGGTGCCCG CGCCGCTGCT CGAGATGTTC
GCGCAGGCGC GCATCGACAT GCTGATGAAC ATGATCGCGC GGATCGCGAC GCCGATGATG
GCGATGCTGT TGCTCGTCGA CCTGGGCCTC GCGTTCGTCG CGCGATCGGC GCAGAAACTC
GATCTGATGT CGGTCAGCCA GCCGCTGAAA GGCGCGATCG CGGTGCTGAT CGTCGCGGTG
CTGGCGGGGA ATTTCGTGAG CGAGATGCGC GGGCAGATTT CGCTCTCGGG ACTGGCGCAG
CAGATCGGGC GACTCGCGCG GCAGCCGGCG GGTGGGGTTT CGGGGGTTTC GGGGGTTTCG
GGGGTTTCGG GGGTTTCGGG GGTTTCGGGG GTTTCGGGGG TTTCGGGGGT TTCGGGGGTT
TCGGGGGTTT CGGGGGTTTC GGGGGTTTCG GGGGTTTCGG GGGTTTCGGG GGTTTCGGGT
GCTTCGGGTG CTTCGGGTGC TTCGGGCGCT TCGGGCGCTT CGGGCGCTTC GGGCGCTTCG
GGCGCTTCGG GCGCTTCGGG TACGTCAAGC ACTTCGAGCA CTTGGGACGC CACCAGCGTC
ACAACCGTCC GCTGA
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| Protein sequence | MTTYDIFALQ HLGDEFIRFI VLLALSSERL LVLMAILPAT ADNVMKGPMR SGAAAVWCLF
VAGGQQALIP QLHGAFLMIA CVKEAVIGLV LGIAASTVFW AAEAIGTYLD DVAGFNNVQM
QNPSSGAQTS LMATLFGQLT IASFWLLGGM TFLLGALYES FAWWPFGSFD PVPAPLLEMF
AQARIDMLMN MIARIATPMM AMLLLVDLGL AFVARSAQKL DLMSVSQPLK GAIAVLIVAV
LAGNFVSEMR GQISLSGLAQ QIGRLARQPA GGVSGVSGVS GVSGVSGVSG VSGVSGVSGV
SGVSGVSGVS GVSGVSGVSG ASGASGASGA SGASGASGAS GASGASGTSS TSSTWDATSV
TTVR
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