Gene BLD_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1988 
Symbol 
ID6364257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp2372057 
End bp2372932 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content62% 
IMG OID642681197 
Producthypothetical protein 
Protein accessionYP_001955931 
Protein GI189440850 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.250393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGCGCGC TGGAGGGCGA ACACGCATCC GGGCGTCGCG GCGGCAGCGG CGATGCGATG 
GATGTGCATG CCTATGAGCC AGGCGACGAA TCCCGTCTTA TCGATTGGAA GACCAGCGCC
CGCCAAGGCC GCCCCATGGT GGTCGAGCGC GAGCGCCTGT CGACGTCACG GGTCTGGTTG
CTGATGGACG TGGGCCTGGA GATGACTGGC GTATGCCCTT CCGGAGAACG CGCATGGCAG
GTTGCCGCCA ATGCGCTGCG TATGTTCGCC GCACTGTCGT TGCGCCGGTC GGACGATATT
TCGCTGGTGT TCGGCGATGA GTCCAGTATC ACCCGCGTGC CGTTCAACGG TGGGTTCGCG
CAGTTCGAAC GCACGCTGGA CAAGGCGCTT GACCGTGATT GGGATCATCA CCGTAATATC
GACGCGCTGC TGGAATATGC GCGCCGTATC AAGGATCGCG AGGCATTGAT CGTATTGGCC
ACCGATGAGC ATGCGATGGA GGAGCGGCAT ATCACCACGA TCCGTCGTAT TACCCGCACC
CATCCGATGG TGCTGATCGA TGTGGCGACG ATGAATCCGT TCAAGGCCGT CTCATCCCGC
CACGCTCCCA CCGACGGCTT GAGTGCACGG CGTGTGCCGG CATTCCTGCG CAACGTCAAG
GCAGCGGCCG AGGTCGATAC TCATCGCGCG TATATGGCCG CGGCTTTGGA ACAGGAGCTC
ACCCGTGCCG GTTCCCATAT CATTCGATCC GCATCCAGCG AATCCATGTT CGATCGTTTC
GTCGCCCTGG TGTCCCGGGC ATTGGCCCGC ACCACACGCA ATAGACTGGG TACTGCACCC
GAACTGGTCG GACTGACTTT GGCTGGTGAT CTATGA
 
Protein sequence
MGALEGEHAS GRRGGSGDAM DVHAYEPGDE SRLIDWKTSA RQGRPMVVER ERLSTSRVWL 
LMDVGLEMTG VCPSGERAWQ VAANALRMFA ALSLRRSDDI SLVFGDESSI TRVPFNGGFA
QFERTLDKAL DRDWDHHRNI DALLEYARRI KDREALIVLA TDEHAMEERH ITTIRRITRT
HPMVLIDVAT MNPFKAVSSR HAPTDGLSAR RVPAFLRNVK AAAEVDTHRA YMAAALEQEL
TRAGSHIIRS ASSESMFDRF VALVSRALAR TTRNRLGTAP ELVGLTLAGD L