| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1893 |
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| Symbol | livM |
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| ID | 6363619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2248428 |
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| End bp | 2249516 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642681101 |
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| Product | branched-chain amino acid ABC transporter permease |
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| Protein accession | YP_001955836 |
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| Protein GI | 189440755 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00991478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA CAATGCTTTC CACCAAACAG TCCTATCTGG TGTGCTTCAT CGGCATCCTC
GCCGCGTTCG GCATCGTGAT GGCGCTGTGC GAATCCGGCT TGGCCGGCTC CTACATCAAG
GGCATCATGA TGACCGCGTG CATCGCCATC ATCATGACCA CCTCCCTGAA CCTCACCATC
GGCGTGCTCG GCCAGCTGAC GCTGGGATGC TGCGGTTTCG AGGCCATCGG CGCCTACGTG
GCCGCACTGA CCTCCAAATA CATGGTCGCC GCCGGCATTG CCATCGACCC CACCGCCCGC
TTCCTGCTCA CCACGCTGAT CGGCGGCGTG GTGGCCTGCG TGTTCGGCAT CCTGATCGGC
ATTCCTGCCC TGCGACTGCA CGGCGACTAC CTGGCCATCA TCACGCTGGG CTTCGGTGAG
ATCATCCGCG TGATCATCCA GAACCTCAAG GTAGCCGGCG GCATGGGCCT CGACAAGGGC
GCCGCCGGAC AGGCGCTGAT CGGCATCGAA CGCACCGCCA ACCTGTACGT CGTGTTCTGG
ATCATGGTGG TCACCGTGGT CGTGCTCTTC ATGTTCGGCC GCTCCCGTTA CGGCCGTGCG
GTCAAGGCCA TCCGCGACGA CGAGATCGCC GCCGGCGCCT CCGGACTCAA CACCACGTAC
CTCAAGGTGC TCGTCTTCGC GATCTCCGCG TTCTTCGCGG GCATCGCCGG CGGTATCTTC
GCCCAGTACA TCGGCTCGCT CAACCCCACC ATGGCCGGTT GGCTCAACTC CATCAACTAC
GTGATCATGG TGGTGTTCGG CGGCATGGGT TCGCTCACCG GCTCGATCGT CTCCGCCATC
GGCCTGACCA TCCTGCCCGA GCTGCTGCGC GCCTTCGCCG ACTACCGTAT GCTCGCCTAC
TCGGTGGTGC TGGTGCTCGT CATGATCTTC CGCCCGCAGG GCATCTTCGG ATCCTGGGAG
TTCTCACTGC CGCGTCTGGT CAACCGCATG CTGTTCCGCG GCGCCGCCGG CAAGGGCGCG
AAACCCGCGG CCAGCGCCAA GCAGCATGAC CAGTCCGACG ACAAGACCGT GAAGGAGGCC
TCACGATGA
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| Protein sequence | MKKTMLSTKQ SYLVCFIGIL AAFGIVMALC ESGLAGSYIK GIMMTACIAI IMTTSLNLTI
GVLGQLTLGC CGFEAIGAYV AALTSKYMVA AGIAIDPTAR FLLTTLIGGV VACVFGILIG
IPALRLHGDY LAIITLGFGE IIRVIIQNLK VAGGMGLDKG AAGQALIGIE RTANLYVVFW
IMVVTVVVLF MFGRSRYGRA VKAIRDDEIA AGASGLNTTY LKVLVFAISA FFAGIAGGIF
AQYIGSLNPT MAGWLNSINY VIMVVFGGMG SLTGSIVSAI GLTILPELLR AFADYRMLAY
SVVLVLVMIF RPQGIFGSWE FSLPRLVNRM LFRGAAGKGA KPAASAKQHD QSDDKTVKEA
SR
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