| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1762 |
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| Symbol | |
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| ID | 6363298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2105459 |
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| End bp | 2106775 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642680964 |
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| Product | MalE-type ABC sugar transport system periplasmic component |
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| Protein accession | YP_001955705 |
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| Protein GI | 189440624 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000740157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTATCGC ACAACAAGCG CATCGTGGCT GCTCTTGCCG CGGTAGCAGC AATGGGTATT
GGTTTGGCCG GTTGCGGCGG CAGCGACACT GCCGGCGACA CGAAGTCCGG CAGCGATGGC
GGTGTGGTCA ACATCACCTA TATGCATCGT CTGCCCGATT CCGAAGGCAT GACCTTGGTC
AACGACATTG TGGCCAAGTG GAACAAGGAG CACCCGAACA TTCAGGTCAA GGCCACCAAG
TTCGATGGCA ATGCCGCCGA CATGATCAAG AAGCTCGAGA CCGACGTCAA GGCTGGCAAT
GCGCCGGATT TGGCTCAGGT CGGTTACGCC GAGGTTCCTG AGGTCTTCAC CAAGGGCCTT
CTGCAGGATG TCACCGATGA GGCCGCCAAG TACAAGGACG ATTTCGCCTC CGTCCCGTTC
GCACTGATGC AGGTGGACGG CAAGACCTAC GGTCTGCCGC AGGACACCGG CCCGCTGACT
TACTTCTACA ACGCCGCTGA ATTTGAGAAG CTCGGCATCA CCGTGCCGAA GACCGCTGAC
GAGCTCATTG AGACCGCCAA GAAGACCGCT GCCCAAGGCA AGTACATCAT GACCTTCACA
CCTGATGAGG CCATGATGAT GATGTCCGGC CAGGCCGGCG CTTCCGGTCC GTGGTACAAG
GTCGACGGCA ACTCCTGGGT TGTCAACACC CAGACTAAGG GCTCCAAGGC CGTGGCCGAT
GTCTACCAGC AGCTGATCGA CAACAAGGCC GCCCTCACCA ACCCGCGTTG GGATGCATCG
TTTGATAACT CCATCCAGTC CGGTCAGCTG ATCGGCACCG TGGCCGCCGC TTGGGAAGCC
CCACTGTTCA TCGATTCCGC CGGTGGCACT GGTGCTGGTG AGTGGAAGGT CACCCAGCTC
GGTGACTGGT TCGGCAATGG CACCAAGACC GGCGCCAATG GTGGTTCCGG TGTGGCCGTG
CTCAAGGGTT CCAAGCACCC GGCCGAAGCC ATGGAGTTCC TTGACTGGTT CAACACCCAG
GTTGATGACC TTGTCTCCCA GGGCCTTGTC GTGGCCGCCA CCACCGCGGA TGCCAAGACC
CCGCAGAAGT GGTCCGACTA CTTCAGCGGA CAGGATGTCA TGGCTGAGTT CAAGACCGCG
AACGACAACA TGGGTGACTT CACCTACATG CCTGGCTTCT CCGCAGTCGG CGCTGCAATG
AAACAGACCG CCGCCAAGGC TGCCGATGGT TCTGCCAAGG TTTCGGATGT GTTCGACACC
GCTCAGAAGA CCTCGGTGGA TACGCTGAAG AACCTCGGTC TGTCCGTCAA GGAGTGA
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| Protein sequence | MVSHNKRIVA ALAAVAAMGI GLAGCGGSDT AGDTKSGSDG GVVNITYMHR LPDSEGMTLV
NDIVAKWNKE HPNIQVKATK FDGNAADMIK KLETDVKAGN APDLAQVGYA EVPEVFTKGL
LQDVTDEAAK YKDDFASVPF ALMQVDGKTY GLPQDTGPLT YFYNAAEFEK LGITVPKTAD
ELIETAKKTA AQGKYIMTFT PDEAMMMMSG QAGASGPWYK VDGNSWVVNT QTKGSKAVAD
VYQQLIDNKA ALTNPRWDAS FDNSIQSGQL IGTVAAAWEA PLFIDSAGGT GAGEWKVTQL
GDWFGNGTKT GANGGSGVAV LKGSKHPAEA MEFLDWFNTQ VDDLVSQGLV VAATTADAKT
PQKWSDYFSG QDVMAEFKTA NDNMGDFTYM PGFSAVGAAM KQTAAKAADG SAKVSDVFDT
AQKTSVDTLK NLGLSVKE
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