Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1735 |
Symbol | truA |
ID | 6363621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 2069082 |
End bp | 2069993 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642680935 |
Product | pseudouridylate synthase |
Protein accession | YP_001955678 |
Protein GI | 189440597 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.347749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACGAC TGCGCATTGA CTTGGCCTAC GACGGCGGCG GATTCTATGG CTGGGCCAAA CAGCCCAATC TTCGTACAGT GCAAGGCACC ATTGAAGATG CGCTGCACAA GGTGCTGCGG GTGCCGACCG ATGACGCGGC CGAACCGTTA CGCTTGACAG TGGCTGGACG CACCGACACC GGTGTACATG CCTCCCACCA AGTGGCGCAT CTGGATGTAT CCGATGAGGT ACTGAATCGC TGCGTAGGTC ACATGACCAT TCCGGTCACC GAGGCGCTGA CTCGCAGACT CAAGGCTGTG CTGCCTTCGG ACATCGTCAT TCATGGCATT GCCGTAGCTC CGGTCGGCTT CGATGCCAGG TTCTCCGCAT TGGAGCGCAC TTATGTGTAT CGGGTCGCCG ATCGTTCGTC TGAGGTCGAC CCGCGCCTGC GTGGATGCGT ACTTACCGTG GATGAAGCGC TGGATCTGGA GCTTATGAAC CGCGCAGCCT CATTGACCAT CGGCCTGCAC GATTTTGGTT CCTTCGCCAC TCCGAATCCG GGAGGCACTA CGATCCGTGA AGTCAAGACC GCCTATTGGC GGCGGGTGCC GATCACTCCC CTAGTACCGG ATGAGATGGC ATCGCATGAA GCATATCGGA CTCCGTCGCT GGAGTCCGGC CTGGTAGTGT TCACGATTGT GGCGGACGCC TTTGCCCGCA ATATGGTGCG CTCCCTGGTC GGCTCATGCA TCAAAGTTGG TTCGGGACGC AAATCACTGG AGTGGTTTGC CGGCAAAATG GCCGAGCCAG TACGTGAAGG CTCAAGCGGG CCGATTGCGC CGCAGGGCCT GACTTTGGAG CATATCGCAT ATCCCGCCGA TGATCAGCTG GCCGCAAGAG CCGAGGCCAT TCGGGCCGTA CGTACGTTGT AG
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Protein sequence | MTRLRIDLAY DGGGFYGWAK QPNLRTVQGT IEDALHKVLR VPTDDAAEPL RLTVAGRTDT GVHASHQVAH LDVSDEVLNR CVGHMTIPVT EALTRRLKAV LPSDIVIHGI AVAPVGFDAR FSALERTYVY RVADRSSEVD PRLRGCVLTV DEALDLELMN RAASLTIGLH DFGSFATPNP GGTTIREVKT AYWRRVPITP LVPDEMASHE AYRTPSLESG LVVFTIVADA FARNMVRSLV GSCIKVGSGR KSLEWFAGKM AEPVREGSSG PIAPQGLTLE HIAYPADDQL AARAEAIRAV RTL
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