| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1685 |
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| Symbol | |
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| ID | 6364479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2025989 |
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| End bp | 2027224 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642680884 |
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| Product | N-succinyldiaminopimelate aminotransferase |
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| Protein accession | YP_001955628 |
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| Protein GI | 189440547 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03539] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCTTCC ACGCATATTC GTCGCCATAC GACTGGTCTC GTATCGCCGG CTTCAAAGCC
ACCGCCAAAA CCGTGCCGGG TGGCATGATC GACCTGTCCG TAGGCTCGCC TGTGGACCCG
GTGCCGAGCA GTGTCCAGCA GGCGCTGGTT GCCGGCGCAG ACGCCCCCAA CGCCCATGGA
TACCCGGTCA CCGCCGGCAC CGCCGACCTT AAGGCCGCTA TCGATACATG GTTCCGCGAA
CTGCGCGGGG TGGATCTGAA ATCCATCAAC GCTGCCGCCG TACCCACCGT GGGTTCCAAG
GAGGCCGTGG CGCTGATGGC CAGCCTGCTG CACCTTGGCG AAGGCGATGT GGTCGTCCAA
CCGGCTGTCT CCTACCCGAC TTACGAAATC GGTACCCAAC TTGCCGGCGC CACCGTGGTC
AAAGTCGATG ATGTGACCGA CGTCGATTCC TGGGTGAATA TTCCGAACGT CAAGGCCATC
TGGATCAACT CGCCGTGTAA TCCCTCCGGC GAGGTCATCT CCGCTGACTG GCTGACCGAC
ATCGTGGCTG CTGCCCGTCG CATCGGTGCC GTGGTGCTCT CCGACGAATG CTATGCGTTA
ATGGACTGGC GTTCGGTGCG CCGCAATACA GCCGCGTCCT CTGCGCCTGC CGCGTCTGCA
TCTGCTGCGT CTGTGCCTGC CGCACCGGTG GCCGAATCCA ACGAGCCCGC CTCCGATACC
GCATTCAGTC TCTCCGCCAC GCCATGTGCC CTGAATCCAC ATGTGTGTGA AGGTTCGGCA
GCTGGCATCC TGGTGCTCTA CTCGCTGTCC AAGCAGTCCA ACATGGCCGG CTACCGTACG
GCTCTAATTG CCGGCGATTA CCGGCTGGTC AAGGAAATGG CCGAATACCG CAAGCAGATC
GGCCAGATTA TCCCTGGCCC AGTGCAGGCC GCCATGGCCG CAGGCCTGAA GGACACAGCC
GCTGTGCACG AGCAATGGAG GCGTTACCGT CGCCGCCTAT CCGCGCTGGT TGACGCACTG
AAGGCATATG GCTATTCGGC ACAAATGCCC TCCGGCGCGC TGTACGTATG GGTCAAGGCC
AAGTCCGGCG ACTGCTGGGC CGATATGGCC GAGCTCGCCA AGATCGGCAT CATCCCCAGC
CCCGGCGAAT TCTACGGCGC TCCCGCCTAC CTGCGTTTCT CCGCCACCGC CACCGACGAG
GCCATCCGTT CCGCCTGCGA ACGTCTCACG GCGTAA
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| Protein sequence | MGFHAYSSPY DWSRIAGFKA TAKTVPGGMI DLSVGSPVDP VPSSVQQALV AGADAPNAHG
YPVTAGTADL KAAIDTWFRE LRGVDLKSIN AAAVPTVGSK EAVALMASLL HLGEGDVVVQ
PAVSYPTYEI GTQLAGATVV KVDDVTDVDS WVNIPNVKAI WINSPCNPSG EVISADWLTD
IVAAARRIGA VVLSDECYAL MDWRSVRRNT AASSAPAASA SAASVPAAPV AESNEPASDT
AFSLSATPCA LNPHVCEGSA AGILVLYSLS KQSNMAGYRT ALIAGDYRLV KEMAEYRKQI
GQIIPGPVQA AMAAGLKDTA AVHEQWRRYR RRLSALVDAL KAYGYSAQMP SGALYVWVKA
KSGDCWADMA ELAKIGIIPS PGEFYGAPAY LRFSATATDE AIRSACERLT A
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