Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1618 |
Symbol | obgE |
ID | 6363982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 1934343 |
End bp | 1936034 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642680809 |
Product | GTPase ObgE |
Protein accession | YP_001955561 |
Protein GI | 189440480 |
COG category | [R] General function prediction only |
COG ID | [COG0536] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR02729] Obg family GTPase CgtA [TIGR03595] Obg family GTPase CgtA, C-terminal extension |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.664599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATT TTGTGGATCG AGTAACCGTC CATGTCAAGG GCGGCGATGG GGGCAACGGT TCGGCCGGCA TCCGTCGTGA GAAATACAAG CCGTTGGCCG GCCCGAACGG CGGCAATGGC GGCGACGGTG GTTCCGTGGT GTTCGTGGCC GACCGTAACG CCACCAGCCT GCTCGACTAT CGTTTCATGC CGCATCGTGT CGCCGGCAGC GGCACCATGG GTTTGGGCGA CAATAAGGAC GGCTCCAAGG GCGAGGACCT GATTCTGCCC GTGCCCTGCG GCACCGTCGT CTTTGAGGCG CGCGGCGAAC AGGGCAAAGC CAAGCATCCC GGCGCACAGC TCGCCGACCT GCGCCACGAG GGCGACCGCT GCGTCGTCGC CCAAGGCGGT GCCGGCGGCC TCGGCAACAT CGCCCTGGCT AACAAGACCC GCCGCGCCCC CGGCTTCGCC CTGCTCGGCG AACTCGGTGA AGAGCGCGAC GTGATTTTGG AATTGAAGTC CATCGCCGAC GTGGCGTTGG TCGGTTTCCC CTCGGCCGGA AAGTCGTCCC TGATTGCGGC GATGAGTTCC GTCAAGCCGA AGATCGCCGA CTACCCGTTC ACCACGCTGG TGCCGAATCT CGGCGTCGTT ATCGCCGGCG ACTCTCGATA CACCATCGCC GACGTGCCGG GCCTGATTCC GGGCGCCTCC GAAGGCAAGG GCCTGGGACT GGAGTTCCTG CGCCACATCG AACGTACCGA AATCATCGCC CATGTGATCG ATTGCGCCAC GCTTGAACCG GACCGCGACC CGATGTCCGA CTACCACGCG CTGGAAAACG AGTTGGCGCT CTACGCCGAC AAGCTCGAGC TGCCGTTGGG TGCCATCCCG ATTCCCGAAC GCCCGCGCAT CGTGATTCTG AACAAGATCG ATGTGCCCGA GGCCAAGGAA TTGGCTGAGT TCGTGCGTCC GGAGTTCGAG AAACTCGGGC TGAAGGTCTT TGAGATCTCC ACTGCCTCGC ACGAGGGTCT AAAGGAGCTC AACTTCGCGT TGTCTGCGCT GGTGCACGAG ATGCGTGAGG AAGTGGCCAA CCGCGAGCAG GCCGAAGAGG AGGCTCGCGT GGTCATCAAG CCATTGGAGA CCAAGGGCCG CCGTCCGCGT CGTGCTGACG AGGGCGGCAG TGCGCTTGAG TTCACGGTCG AGCGCCGCGA ACTCGGCAAT GGCGAAGTGT TCTTCGAGGT GCGTGGCGTC AAGCCGGAGC GCTGGGTCAT GCAGACCAAC TTCGACAACG ACGAGGCCGT GGGCTACCTG GCTGACCGCT TGGCCAAGCT GGGCGTGGAG GACGAGCTGC GCCGCAAGGG TGCTCACCCC GGCGACGAAG TGCGCATCGG TCGTGGTGCC CGTATGGTCG AATTCGATTG GGATCCGACC ATCTCCGCTG GTGCCGAAAT GCTCGACGGC TCCAACCTCG GTGCCCGAGG CAAGGATCTG CGTCTCGAAG AGCTGGACCC GCGCACGCAC CGCCGCTCCA ACGCCGAACG TCGTGCCCAA TACCACGAGA TGATGGACGC CCGTGCCGCC GTGCGCGACG CGATGATGGC CGAACGCAAG GCCGGCCACT GGGCCGACCC GACCGTTGAC GACGATCGCC ATGACGAAAC CAGCCTGTTC GGCCACGGTG AGTCCAGCGA AGATGGTGAA ACCGAGGAAT AA
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Protein sequence | MSDFVDRVTV HVKGGDGGNG SAGIRREKYK PLAGPNGGNG GDGGSVVFVA DRNATSLLDY RFMPHRVAGS GTMGLGDNKD GSKGEDLILP VPCGTVVFEA RGEQGKAKHP GAQLADLRHE GDRCVVAQGG AGGLGNIALA NKTRRAPGFA LLGELGEERD VILELKSIAD VALVGFPSAG KSSLIAAMSS VKPKIADYPF TTLVPNLGVV IAGDSRYTIA DVPGLIPGAS EGKGLGLEFL RHIERTEIIA HVIDCATLEP DRDPMSDYHA LENELALYAD KLELPLGAIP IPERPRIVIL NKIDVPEAKE LAEFVRPEFE KLGLKVFEIS TASHEGLKEL NFALSALVHE MREEVANREQ AEEEARVVIK PLETKGRRPR RADEGGSALE FTVERRELGN GEVFFEVRGV KPERWVMQTN FDNDEAVGYL ADRLAKLGVE DELRRKGAHP GDEVRIGRGA RMVEFDWDPT ISAGAEMLDG SNLGARGKDL RLEELDPRTH RRSNAERRAQ YHEMMDARAA VRDAMMAERK AGHWADPTVD DDRHDETSLF GHGESSEDGE TEE
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