Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1474 |
Symbol | |
ID | 6363244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 1719057 |
End bp | 1720355 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642680661 |
Product | putative permease |
Protein accession | YP_001955417 |
Protein GI | 189440336 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATTCG GACTGTCCCT GCTGTATTGG GGATTATGGT TGGCGATTCT GATTCTGTGG ATGGGTCGCT TCGTGACCTC ATTCTTGTCG ATATATTTGG TTTCCGCGCT GCGCCTCGAT GAGGGTGTGG TGGGCACAGT CGTGGCCATG TACGGCTTCG GCGCAATCAT CGGCTGCCTG TTCGGCGGTA CCTTGTCCGA CAGATTCGGC CGCCAATCCA TGATTATCAT CGGCGAAATC GGCGCAGCGG CTGCCCTGCT GGTCGTTTCC GTACTCACTG ATCCTGTGTC TTTAGGCGCG GCTCTGTTCG TCTATGGTGC GTTCGCCTCG CTGCCCAGCC CGGCCATCGC CGCGTATATC GCGGATGTGG TGCCTGCCGA ACGTCAGCAA CGTGCATACG TACTGCAATC GTGGGCGATT AATTTTGGGT ACGCGATTGG ACCGATTGTG GCCAACCAGC TGGTCAAGAT CTCGTATTCG CTGATGTTCT ACGTTGAAGC GGCGGTGATG ATAGCCGTCA CGATATTGCT GATTGCGTTC TTCCGCGAGG TGCGGCATTT GGGGATTACT GTATCGGTGC CAAGTGCGGT GCGCCATGAA GACGAATGCA GTGTTACCCA TGCGGAATTC GCCGGCATTG AGAGGCCGAA TCACTCGGAT GCCGCACCGG CTGCCAGTGT CAAGGGCGCC ATGTCTCGCA ATTGGCGGCG CGTGCTCACC GATACTCCAT TCCTCGGCTT CTCCCTGCTG ATGTTCGGCT ACTTCCTTGT GTACTTCCAA AGCACCTCCG GCCTGCCCAT TGCCATGACG GACCTTGGTC TAGGGCTGGG CGAGTATTCG GTGCTGCTCA CCATCAATGG CGGTATGTTG TGCCTGCTGC AGATTCCCGC GATGAAACTG TTCGCGCGCA TGGGCAATTC ACGCGTGCTG GTGATGGGCC TCGCCGTAAC CGTCATCGGC TATGCGGTGC AGGCCGCGGC CCATTCTTGG GGCGGATTCG CGCTTGCCGT AGTGCTGTGG ACGCTGGGTG AGCTGGGCAC ATTCCCTATC GCCACCACTA CGGTTGCCGC CATGGCACCC GCGTCGGCGC GCGGCACGTA TCAGGGCGTC TACAACGTAG TGTGGTCGGC GTCGATTGCG CTGGCGCCGA TGATTGGTGG CTGGACTATC AGCAACTTCG GCGGTCGAAC GCTGTGGATC GCCTGCACTG TTGTGTTGAT TGCCGTGACC CTCGGTCTCA AGCTCACCAA AGGCTCGCGC GACCGCGCCA TGGCCCGCAG TCTTCACGAT TCGCTGTAA
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Protein sequence | MIFGLSLLYW GLWLAILILW MGRFVTSFLS IYLVSALRLD EGVVGTVVAM YGFGAIIGCL FGGTLSDRFG RQSMIIIGEI GAAAALLVVS VLTDPVSLGA ALFVYGAFAS LPSPAIAAYI ADVVPAERQQ RAYVLQSWAI NFGYAIGPIV ANQLVKISYS LMFYVEAAVM IAVTILLIAF FREVRHLGIT VSVPSAVRHE DECSVTHAEF AGIERPNHSD AAPAASVKGA MSRNWRRVLT DTPFLGFSLL MFGYFLVYFQ STSGLPIAMT DLGLGLGEYS VLLTINGGML CLLQIPAMKL FARMGNSRVL VMGLAVTVIG YAVQAAAHSW GGFALAVVLW TLGELGTFPI ATTTVAAMAP ASARGTYQGV YNVVWSASIA LAPMIGGWTI SNFGGRTLWI ACTVVLIAVT LGLKLTKGSR DRAMARSLHD SL
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