Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1473 |
Symbol | spoU4 |
ID | 6363243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 1717977 |
End bp | 1718969 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642680660 |
Product | rRNA methylase |
Protein accession | YP_001955416 |
Protein GI | 189440335 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATCA AAAAAGGACC GACCAAGGGG TCGGGTGGCA AGCATCGCAA CAAACTGAAG GGCTACGGCC CCACTCCCAA GGCCGAGGAC CGCGTCTATC ACAAGGCGTA CAAGGCCAAG AAAGCGGCCG AACGTCGGCA GATGGCCGAC CCGCGTCTGG CAGCCCGCCG TCGAGTGGAC AAGTTCGCTT CGGCGGATAC TTCGGATCTG GTGTACGGCC GTAATTCCGT GCTGGAAGCA CTGCGCGTAG GCGTACCTTC TTCCACGCTG TACATCATGT CTCGTATTGA ACATGACGAT CGTACTCGCG AAATCGTGAA AATCGCTGGT ATGAACGGCC TGCACATGCT GGAGGCCGAT CGTCTGGAGA TGGATCGTAT CGCCCGCTCT GGCAACCATC AGGGCGTGAT TCTGAAGGTC GATCCGTTCC AGTACTCCTC GCTGAACGAG CTGGCCGATC GTGCTGAGAA GAAGGCCAAG GCAATGGAGG CCGCGAATTC GGCGGCCGCC CGTATTGCTG CGCGACCGCT GTTTATCGCA TTGGACGGCG TGACCGATCC GCAGAACCTG GGTGCCGTGA TTCGTTCGGC GGCCGCATTC GGTGCCAATG GTGTGATTCT GCCGGAACGC CGTTCCGCTT CAGTGAACGC CGCCGCTTGG AAGGTGTCTG CCGGTGCGGC CGCGCATATG CCGGTGGCGC GCGTGGTGAA CCTGACTAAG GCACTTGAGG GCTTGAAGGA GCGTGGATAC TACGTTGTCG GCCTTGACGG TGGCGGCGAT AAGCTCGTCG GCGAGACTGG CTTTGAATCC GATCCGCTCG TTGTAGTGCT CGGTTCGGAA GGCAGCGGTT TGGGCCGACT GGTGCGCGAA ACCTGCGACG CGATTGCCGG CATCCCGATC AGCTCGTCTG TTGAGTCGCT GAACGCTTCA GTGGCGGCGG GTATCAGCCT GTACGCGGTG TCCAACGCAC GGCGCAAGGC TGCGGCGGAG TGA
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Protein sequence | MAIKKGPTKG SGGKHRNKLK GYGPTPKAED RVYHKAYKAK KAAERRQMAD PRLAARRRVD KFASADTSDL VYGRNSVLEA LRVGVPSSTL YIMSRIEHDD RTREIVKIAG MNGLHMLEAD RLEMDRIARS GNHQGVILKV DPFQYSSLNE LADRAEKKAK AMEAANSAAA RIAARPLFIA LDGVTDPQNL GAVIRSAAAF GANGVILPER RSASVNAAAW KVSAGAAAHM PVARVVNLTK ALEGLKERGY YVVGLDGGGD KLVGETGFES DPLVVVLGSE GSGLGRLVRE TCDAIAGIPI SSSVESLNAS VAAGISLYAV SNARRKAAAE
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