Gene BLD_1275 details

Gene Information

• Locus tag: BLD_1275
• Symbol: tmk
• ID: 6363901
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bifidobacterium longum DJO10A
• Kingdom: Bacteria
• Replicon accession: NC_010816
• Strand: -
• Start bp: 1468517
• End bp: 1469137
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642680457
• Product: thymidylate kinase
• Protein accession: YP_001955218
• Protein GI: 189440137
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGGTC TGTTTGTTTC GTTTGAAGGT GTCGATGGCG TGGGCAAGAC CACGCAAGTC 
GAGCGGCTGC GTGCGTATCT TGAGGCTCAG GGGCGTACCG TGGTCGTTAC CCGTGAGCCG 
GGAGGCACTG CGTTAGGCAA GGCCATTCGC CAACTGCTGT TGCACGGTGT GGATGGGGGC 
GCCGTCGACA TCGCACCGCG CGCCGAGGCG CTGCTATTCG CTGCAGACCG AGCCCAGCAC 
GTTGCCGAAA CCATCCGCCC GGCATTGGAG CGCGGTGAAG TGGTGATCAC CGACCGCTAT 
TTAGACTCTT CCTTGGCCTA TCAGGCCGGT GGCCGCGAAC TCACGCCAGA AGAGATTCGA 
TCCTTAAGCA TGTGGGCCAC CAACAACCTG CTGCCCGACC GCACATATCT GCTGGACATG 
GATCCGGCGC TTTCCCACAA TCGTCTTGAG CATGCCGAAG ATCGCATGGA GTCGGCCGGC 
AGCGACTTCC AGTCCCGCAC CCGTCAGGCG TTCCTCGACT TGGCCGCGGC CGAGCCGAAT 
CGTTTCCGCG TTATCGATGC GAGCCAGAGC ATTGAAGCGG TATGGGCTGC CATCGAATCC 
GACATCAAGG AGCTCGCATG A 

 

Protein sequence

MSGLFVSFEG VDGVGKTTQV ERLRAYLEAQ GRTVVVTREP GGTALGKAIR QLLLHGVDGG 
AVDIAPRAEA LLFAADRAQH VAETIRPALE RGEVVITDRY LDSSLAYQAG GRELTPEEIR 
SLSMWATNNL LPDRTYLLDM DPALSHNRLE HAEDRMESAG SDFQSRTRQA FLDLAAAEPN 
RFRVIDASQS IEAVWAAIES DIKELA