| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0893 |
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| Symbol | |
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| ID | 6363219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 1025621 |
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| End bp | 1026697 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642680061 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001954837 |
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| Protein GI | 189439756 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.472007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCAACA TGGCTGCATC CGTCTCTGCC GATGCCGGTA ATGTCCCCGC CGGCAGCATC
ACCAACACCG GCACCAACAA CACCTTCACC AGCACCACCG AATCGTCGCT TGCCACCCTG
CTGTCCAACC AATGCCCGTT CGTTATCAAG GCCACCATTT TCGAGGGCAA TGGCAAAAAC
GCCATTCGCG AACGTCACAC ATTCACCGGC TCGGTGCTGC GCCAGCTCGA CCAAGCCAGC
GCCCTGCTGA ACGGCATCAA CGAATCCGGC CAATACCCGG CCATAGCCCT GCGCGAAGCA
TTGGTCAACG CACTGGAACA TCGCGATTAC ACGTACTCCG GCCCCACACT GATCAATATC
TTCGATTCCC GCTTGGAAAT CGTGTCGCTC GGCGGCCTGA CCGATGGTTT GGAAATCAAC
GATCTACTCA ACGGCGTATG CCAGCCACGC ACCCCGCGTT TGGCTGAATT GTTCGCCGAT
TTGGGCCTCT GCGAGAACTG CGGTACCGGC ATTCAACGCA TTATGGACGC CTACGCGCAG
AGCGCGGTCA GTCCGCAACT GCGCGTGGGC CCCACTTCGG TGGCAATGGT ACTGCCTATC
CCTGTATCGG CCGAGGCCGC GTCCTCGCAT CGGACCGATG CCGATGCTTC CGCCGCGCCC
AGCACCACTG ACGAAGCACA GCATGCCAAA ATGTACTCAT TCCCCACGAT TCAGCGCATG
ACGGATAACG CCGCAGATGC TTTGGCCGGC GCACGCATCA TCGGCTGCGC GCCACTGCAG
ACGCTGATTC TCGGCAGTGG ATTCGGCGAG CGCCCGGACG GTGACGATCA GGCCAGTACC
CGCCCGCTTG ATACGGCGAC GCTGGAACCG TCGCCTCAAA CGTTGGAACA GTTCACGCTC
AATTTCCTCG CGTTCCGCGG TGTGAAGCTC AGCCGTAAAA CCATGCAGAA AGCGCTTGGC
CTGAACAAGG ATCAGATGAC GCAGCTCTTG GACCAGCTGG AGTTGAGCGG CAAGATCGAA
CGTCATACGC ACGCCAAGTC CACTACGTAT TCGCTGGCAC ATGCCTCAGG ACGGTAG
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| Protein sequence | MTNMAASVSA DAGNVPAGSI TNTGTNNTFT STTESSLATL LSNQCPFVIK ATIFEGNGKN
AIRERHTFTG SVLRQLDQAS ALLNGINESG QYPAIALREA LVNALEHRDY TYSGPTLINI
FDSRLEIVSL GGLTDGLEIN DLLNGVCQPR TPRLAELFAD LGLCENCGTG IQRIMDAYAQ
SAVSPQLRVG PTSVAMVLPI PVSAEAASSH RTDADASAAP STTDEAQHAK MYSFPTIQRM
TDNAADALAG ARIIGCAPLQ TLILGSGFGE RPDGDDQAST RPLDTATLEP SPQTLEQFTL
NFLAFRGVKL SRKTMQKALG LNKDQMTQLL DQLELSGKIE RHTHAKSTTY SLAHASGR
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