Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0778 |
Symbol | pth |
ID | 6362675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 894495 |
End bp | 895094 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642679944 |
Product | peptidyl-tRNA hydrolase |
Protein accession | YP_001954722 |
Protein GI | 189439641 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0193] Peptidyl-tRNA hydrolase |
TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.881763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCATCGG ATTTCTGGCT GATTGCGGGA CTGGGCAACC CCGGCAAAAA ATATGAGGAC ACGCGGCACA ACATGGGCTT CATGACCGCC GACGTGCTCG CCGAACGTTG GACGGTGAAC TTCGCCGATC ACAAGGGCTT GGCCATGCTC GGTAAAAGCG TGATGAACCT GGACGGCCGC ACCGTCAAGT TCTTTCTGGC CAAGCCGCTG ACTTATATGA ATGATTCCGG CAATGCGGTG GCTTCCATTA GCGCCTATTA CCAGATCGAG CCCGACCATA TTGTGGTGAT TCACGATGAC ATGGACTTGG AATTCGGCCG TATCAAGGTC AAGGCAGGCG GCTCCGCAGG CGGCCACAAC GGCATCAAGT CGATTGACCG TTCCCTCGGC ACGCCGAAAT ACGCGCGTGT GCGCATGGGC GTCGGTCACT CCAAGCGCGG TGCGAACGCG CATGACAACA CGGTGAACTG GGTGCTGGGC GGATTCGGTC CGGACCAGCG CAAGCAGCTG CCCGAATTCC TGGCTGACGG CGCCGACGCC GCCGAGGACA TCATCTTCCA CGGTCTTGCC AAGACCCAGG AGAAGTTCAA TGGCCGGTGA
|
Protein sequence | MASDFWLIAG LGNPGKKYED TRHNMGFMTA DVLAERWTVN FADHKGLAML GKSVMNLDGR TVKFFLAKPL TYMNDSGNAV ASISAYYQIE PDHIVVIHDD MDLEFGRIKV KAGGSAGGHN GIKSIDRSLG TPKYARVRMG VGHSKRGANA HDNTVNWVLG GFGPDQRKQL PEFLADGADA AEDIIFHGLA KTQEKFNGR
|
| |