Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0739 |
Symbol | amiR |
ID | 6362820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 848297 |
End bp | 849082 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642679903 |
Product | putative response regulator |
Protein accession | YP_001954683 |
Protein GI | 189439602 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3707] Response regulator with putative antiterminator output domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000540248 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGCAA GGAAGAAGTC CGAAGAACCG AGTATCAACA TCGATGAGGT GCTGACCGAC GAAGAGCTCA AGGCCGTGGC CAATGAAAGC GAACCTGCTG AGCGCAAGGC CAAGCCCGAG GACGGTCCGC GTACCGTTGT CGTGGCCGAG GATGAAGCCG TGAACCGCAT GGATCTGGTC GCCATGCTGG AAGACAACGG TTATGAGGTC GTTGGTCAGG CCGCCAACGG CGAGGAAGCC GTGGAACTGA CCCGCAAGTA CCGCCCTGAT GTGGTGTGCA TGGATGTCAA GATGCCGCGT ATGGACGGCA TCACCGCTGC CGGCATTATC TGCGATGAAA ACATCGCCCC CGTCGTCATG CTCACCGCAT TCTCCCAGAC CGATCTGGTG AAGAAGGCCA CCGGCGCTGG CGCCATGGCA TACGTCACCA AGCCGTACGA GGAATCCAAG CTGCTGCCGA CCCTCGAGGT GGCCATGGGC CGTTTCGCCG AGATCAACGA TTTGCTGGAC AGCGTGGAGC GCAGCGAACG TAAGCTCAAG GAAACCACCG ATCAGCTCAA GGAAACCGAA GAGAAGCTCA AGAAGGCCGA AGACACGCTT GAGGAGCGCA AGCTCGTCGA CCGCGCCAAG GGTCTGCTGA TGGACAAGGC GGACTTCTCC GAGCAGGGTG CCTTCCGTTG GATTCAGAAG ACCTCCATGG ACCAGCGCAT CCCCAAGAAG CGCCTGGCTC AGGCCATCAT CGCCAAGTAC GGCGATCCGA AGCCTTCTGA TTCGGGCGAA CGCTGA
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Protein sequence | MAARKKSEEP SINIDEVLTD EELKAVANES EPAERKAKPE DGPRTVVVAE DEAVNRMDLV AMLEDNGYEV VGQAANGEEA VELTRKYRPD VVCMDVKMPR MDGITAAGII CDENIAPVVM LTAFSQTDLV KKATGAGAMA YVTKPYEESK LLPTLEVAMG RFAEINDLLD SVERSERKLK ETTDQLKETE EKLKKAEDTL EERKLVDRAK GLLMDKADFS EQGAFRWIQK TSMDQRIPKK RLAQAIIAKY GDPKPSDSGE R
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