Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0672 |
Symbol | |
ID | 6364009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 766096 |
End bp | 768738 |
Gene Length | 2643 bp |
Protein Length | 880 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642679830 |
Product | SalY-type ABC antimicrobial peptide transport system permease component |
Protein accession | YP_001954616 |
Protein GI | 189439535 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGTCCA TCACTTTGAA ACTCATGCGA AAAACCAAGC GCATGCTCAT ACCCGCAGGC ATCGCCATCA TGATCGGCAC GGCGTTCATC GCCAGCACCT TCCTGTTCGG CAATGCCATG AACGACTCCC TGACACGGCA GCTGACCGCC ATGTTCGGAA ACGCCAACTA TGCGGTGAGC ATCAACAGCT CCGACCTGAG CGATAAGGAA CTCAACGAGG CGTATTCCAG CACTGTCGGC GACTTTCATC TCGACCAGAT CGCCGGCATC GAAGGGGTTG GCGGCGTCCG CGCCTCGGTG GAAACCGGCG TCAGCGTTTC CAAGGGAGAC AGCACCGTCA GCGGCGAGAT CATTTCCACC GCGGCACAGA AGAACATGCT CCCCGTGAAT ATCACGGAAG GGGACCAGCC GAAGGATTCC AACGAAGTCG CGCTGCCGGA AGACATGGCG ACACAGTTGA ACGTCGGCGT TGGAGACACT GTAAGCCTGA CCTCCCGATA TGCGGTAGGC GACGATGGCA AAGCCAAGGC GGACAACGTG CGCGTGGTCG GACTCACCTC CGACCCGAAC GGCGCCTACT CATACTATGG TGGTGCGATC GTAGGATCCA ACAATCTGCT TGCCGCAATG CAGGGAGTGG ACGATTTCAA CGCCACCGGA ACAACAATGG TGTATCTCGA CCTTGCCTTG GATGGAAATA GCGTATCCGC AAAAACCATC AACAGTGTGA AAGCGTTGCT GCCAAAGCAT TTCGATCTGA TGTCACGACA GCAAATCAGT GACGAAAGCA TCAAATCCTT AAGCGGCAAC CAAACCAACA TCGCCACCAC ATTCCTTATG TGCTTCGGCG TGCTTGCCAT GTTCGTGGCG GCTCTGGTGA TCGCCAACAC GTTCCAAGTG CTCGTGGCGC AACGCCGCCG CACACTCGCC TTGCTACGCA CCATCGGCGC AAAGAAAGGC CAACTGTATG GTTCCGTGCT GTTCGAAGCG GTGGTGCTCG GCTTCGTCGC ATCCGTGCTT GGCGTGGTGC TTGGAAGCCT GCTCATGTGG GGCATGTGCG TCAGCGACAT CATGCAGGCG GGTATGCGGT TCAACTTCTC CTGGCAAGCC GCCGTCGTAC CGATTCTCTT CGGTATTGTG GTGACGGTGC TCGCATCCAT GGGATCCGCA CGTTCCGCCA CCGCGGTAAC GCCATTGGAG GCATTGCGCC CGATTGAACT GACCGACAAC CATCGTTCCA GCCTTACGCG AGCCATAATC GGTATTCTGA TGGTGGTGGT CGGTATCGCC ATGGCCATAT TCTCCATCTG GCAGGTGCAG GCCACCAACG GCGGCGAGGA TGCGAGCGGC GATCAATTCA CGATGATTCT GCTCATAGCC ATCGCCGGTG CCGCACTGGT GTTCCTCGGC ATGGTGGTCA CCGCGGTATT CTGGATGCCG ACCCTCATGA AGGGCGTTGG AGCGTTGGCC TCGCTGACAG GTCCTTCCGC AACAGTTGCA CACGCCAACA TTCAGAAGAA TCCGCGACGC ATCGCAGCAA CCGGTGCCGC TCTGCTCATC GGTGTCACCT TGGTCTCCAC CATCGCAACC GGTGCCGCTA GCGCCAAAGA GACTATGAAT GGTGCGCTCG CCACCCGTTA TAGCGTCGAC ATCGTGGCCA TGGGCGATGA CATCAGCCAG CAAATGGTCA AGGATGTATC TGACATCAAC GGCGTGTCCG ACACGTTGTA TGCACCGGCG GTTTCCGTGA CCTTGGAGAA AGCGGATGGA ACCCAGCCTA CGTCCGCATT GCTGGTCGGC GTGAAAAACA TCGATCAGGT CAAGCAGGTC ATGCGTGCCA ACTTGGGTAA CGCCTCCATC GACAGTGATA GCGTGCTCAT GCCAACATAC AATGCGCAAA CCGGCAAGGA GCTGCAGTTC GCCAATGGCA CGGCTGATTT CTCCACCGAA TGGAACCAGG ACGGCGACGC TACGCGTTCG CTGACATTGC AAGCAAACCA AGCCGATTAC CGTCGCGTAT CCGCACAGTA TGGAGCTGTC GGATTCGTGG ATGAAAGCCA TTTCACCAAT GGTGACCTTG ACGCCGCCAC CCATGTGTTG CTGGTCAAGG CAGATACTGA CAAATCGGGA GTTTCCGTTG ACGGCATCTA CAACAACATG CAGGCCGCAT TGGAGAAGAG CACTGATGCA ACAGTGACCG GACCGATTGC CGAACGCATC GAATGGGCGA ACATGATCGA CTCCATGATG ATGCTTCTGG TGGGGTTGAT CGCCGTGGCC GTGCTCATCG CACTTGTCGG CGTAGCCAAC ACGCTGTCGC TGTCAGTGAT CGAACGCACC CGAGAATCCG CCACACTGCG TGCCATCGGC ATGACTCGAG GCCAGTTGCG ACGCTCCCTC GCGGTGGAAG CCCTGCTCAT CTCGCTGGTA TCCGGCATCT CGGGCGTACT ACTTGGCACA CTGTTCGGCT GGCTGGGCGC ATACGTGGTG TTCAGCATGT ACGGCAAAGT GGTGTTCCCG TTCGAATGGG GCATTAATGG CATCATACTC GCCGTGGCAG CCGTGGCAGC ACTGCTCGCC AGCGTATTCC CCGCACGCAG GGCAGTGAGC ACGCCTCCTG TTGAGGCGCT CGCCGAAGCC TAA
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Protein sequence | MWSITLKLMR KTKRMLIPAG IAIMIGTAFI ASTFLFGNAM NDSLTRQLTA MFGNANYAVS INSSDLSDKE LNEAYSSTVG DFHLDQIAGI EGVGGVRASV ETGVSVSKGD STVSGEIIST AAQKNMLPVN ITEGDQPKDS NEVALPEDMA TQLNVGVGDT VSLTSRYAVG DDGKAKADNV RVVGLTSDPN GAYSYYGGAI VGSNNLLAAM QGVDDFNATG TTMVYLDLAL DGNSVSAKTI NSVKALLPKH FDLMSRQQIS DESIKSLSGN QTNIATTFLM CFGVLAMFVA ALVIANTFQV LVAQRRRTLA LLRTIGAKKG QLYGSVLFEA VVLGFVASVL GVVLGSLLMW GMCVSDIMQA GMRFNFSWQA AVVPILFGIV VTVLASMGSA RSATAVTPLE ALRPIELTDN HRSSLTRAII GILMVVVGIA MAIFSIWQVQ ATNGGEDASG DQFTMILLIA IAGAALVFLG MVVTAVFWMP TLMKGVGALA SLTGPSATVA HANIQKNPRR IAATGAALLI GVTLVSTIAT GAASAKETMN GALATRYSVD IVAMGDDISQ QMVKDVSDIN GVSDTLYAPA VSVTLEKADG TQPTSALLVG VKNIDQVKQV MRANLGNASI DSDSVLMPTY NAQTGKELQF ANGTADFSTE WNQDGDATRS LTLQANQADY RRVSAQYGAV GFVDESHFTN GDLDAATHVL LVKADTDKSG VSVDGIYNNM QAALEKSTDA TVTGPIAERI EWANMIDSMM MLLVGLIAVA VLIALVGVAN TLSLSVIERT RESATLRAIG MTRGQLRRSL AVEALLISLV SGISGVLLGT LFGWLGAYVV FSMYGKVVFP FEWGINGIIL AVAAVAALLA SVFPARRAVS TPPVEALAEA
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