| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0643 |
|---|
| Symbol | |
|---|
| ID | 6363562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 731921 |
|---|
| End bp | 732544 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642679801 |
|---|
| Product | phosphate transport regulator |
|---|
| Protein accession | YP_001954587 |
|---|
| Protein GI | 189439506 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
|---|
| TIGRFAM ID | [TIGR00153] conserved hypothetical protein TIGR00153 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.233591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGAC AAAAAGACAC GTTCTACTTC GACGGATTCC GCCGCAGCGC GGACTACGCA
TGCCAGGCCG CGAAGCTGCT GTCCGAGGTC ATGCACGACT TCAATCCGGG CCAGCTGCGC
GAACGCATGG ACAGCATGCA CGCGATTGAG AAGTCAGCGG ACGAGGTGCG CCACGACATG
ATGGACGAAC TGGTGACCGC GTTCATCACG CCGTTCGACC GCGAGGACAT CGACGAGCTC
GGCCACGTGC TCGACGACGT GACCGACAGC ATCGAAGGCG TGCTCAACCG CATGTACTAC
GACAACGTGA CCGACATGCG CGACGACGCG GTCCAGATGT CGGATATGGT GGTGCGCGCC
ACGGAAAGCA TCTGCGAGCT GGTCAACGAA CTGCCGCGAT TCCGGCATTC CAAGACGTTG
CGCGAACTGG TGTTCGCCAT CAACACGATC GAAACGGACG CCGACCACCT GTTCATCGAG
TCGATGCGCA CGCTGCACAC CACCTGCACC GATCCGCTGC AGGTGTTCGC CTGGCATGAC
GTCTACCGTC ACCTCGAACA GTGCTCCGAC GACTGCGAGC GCGTGGCCAA CACCATCGAC
AGTATCGTCA TGAAAAACAG CTGA
|
|---|
| Protein sequence | MARQKDTFYF DGFRRSADYA CQAAKLLSEV MHDFNPGQLR ERMDSMHAIE KSADEVRHDM
MDELVTAFIT PFDREDIDEL GHVLDDVTDS IEGVLNRMYY DNVTDMRDDA VQMSDMVVRA
TESICELVNE LPRFRHSKTL RELVFAINTI ETDADHLFIE SMRTLHTTCT DPLQVFAWHD
VYRHLEQCSD DCERVANTID SIVMKNS
|
|---|
| |