| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0598 |
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| Symbol | |
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| ID | 6362733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 683839 |
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| End bp | 684636 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642679755 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_001954542 |
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| Protein GI | 189439461 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.70785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATG CCCTTTTTCT TTTCGACCCG CAGGTCGACG ACGTCCCGGT GAACAGCGAC
GAACTCCACG CCGGCTGGAA GCTAACCCTG CCCGCTCACA TCAAGCGCCA TGCCGTGCAG
GCCATGCGAC TCAAGGCAGG GGACAGCCTG CAACTTTCCG ACGGCAACGG CTTGAGAATC
CAGGCAGTGA TGGCCGATCC TGAAGCCGGA CTGGCTGAAG TCGTGGAAGT GGGGCGCGAA
CCCGAGCCGC TCACCCGTTT GGCGCTGATT CAGGCATTGG CGAAAACCGG CCATGATGAG
CAGGCCATCG ATATGGCTAC TCAGATTGGC GTCGACCAAG TGGTGCCATG GCAGGCGGAC
CGATCCATTG CCAAGTGGAA GGTCGGCCGT ACAGACAAGA AGTGGAATTC GGTACTGGAT
GCCGCCACCG AGCAGTCGCG GCGCGCCTTT AAGCCGCAAC TGGAGGCGTG CGCGTCCAGC
AAGGAGGTCG TGGCCATCTG CCGCAGGGCC TGCGTGCATG GCGATGTGGT GATTGTGCTG
CATCAGGATG CTACCGATAC GTGGTCCGGC GTGGAGGAGA AGGTTGCGCA GTTGGTGGAA
CGCACGCTCC AGGACGGCCG GCCGCGGACT GTCAGTGTGG TGGTCGGGCC TGAGGGCGGC
ATCAGTGAGC AGGAGGTAGC TGATTTCGTC AAGGCCGGAG CGGTGAGCTG CGTACTGGGG
CGCAATATTC TGAGAGCCGC GACGGCCGGT CCTGTAGCGT TGTCGCTGTT GTCTCGGGTG
TTGGGACGTT ACGAGTAA
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| Protein sequence | MTDALFLFDP QVDDVPVNSD ELHAGWKLTL PAHIKRHAVQ AMRLKAGDSL QLSDGNGLRI
QAVMADPEAG LAEVVEVGRE PEPLTRLALI QALAKTGHDE QAIDMATQIG VDQVVPWQAD
RSIAKWKVGR TDKKWNSVLD AATEQSRRAF KPQLEACASS KEVVAICRRA CVHGDVVIVL
HQDATDTWSG VEEKVAQLVE RTLQDGRPRT VSVVVGPEGG ISEQEVADFV KAGAVSCVLG
RNILRAATAG PVALSLLSRV LGRYE
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