Gene BLD_0443 details

Gene Information

• Locus tag: BLD_0443
• Symbol: hrcA
• ID: 6363753
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bifidobacterium longum DJO10A
• Kingdom: Bacteria
• Replicon accession: NC_010816
• Strand: +
• Start bp: 529691
• End bp: 530809
• Gene Length: 1119 bp
• Protein Length: 372 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642679594
• Product: heat-inducible transcription repressor
• Protein accession: YP_001954387
• Protein GI: 189439306
• COG category: [K] Transcription
• COG ID: [COG1420] Transcriptional regulator of heat shock gene
• TIGRFAM ID: [TIGR00331] heat shock gene repressor HrcA

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0786222
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCAAT CAAGACGCAT GCTGGTGCTG CGCGCCGTGG TGGAGGATTA CATCCGTTCT 
CAGGAGCCCG TGGGCTCCAC TTCGCTGACG CGCGACCATG ATCTCGGCGT CAGTTCGGCC 
ACCATCCGTA ACGATATGGC CGCTCTGGAG GACGAAGGCT ATCTGATTCA GCCGCACACT 
TCGGCCGGTC GCGTGCCCAC CGAAAAGGGC TATCGATACT TTGTGGACCG ACTTGCTACC 
GTGGTGCCGC TCAGCGAGGC GCAACGCCGC GGCATCAACA GCTTCCTGTC CGGATCGGTG 
AGTCTCAAGG ACGCGCTGCA ACGTTCGGCA CGACTGCTGT CCGAAATCAC CGGTCAAGTG 
GCCGTAGTCG CCTCGCCATC GCTGGCCAAG GCCACATTGC GGCACGTGGA GATGGTGCCC 
GTTGCCATGA CCACGTTGCT CGCCGTGGTG ATTACCGACA CAGGCCGCGT GGCCCAGCAC 
GGCCTGACCA TCGCATCCAT GCCCGCCGTG GACGAGATCA ACCGGCTCTC CAACACCGTC 
AACGAGCAAT GCGACGGGCT GTCCCTATCG AAATCCGCGG AGACCGTGCG ATCCATCGCC 
GCCAGCGCCG GCTACGAGTC GGTGCGTGGC GTGGCCGACG CGCTGGCCGA CGCCTTCGAA 
TCGATGGCAT TGGACGAACG CGCGAACGAA CTGTACATGT CCGGCACCTC GCACCTGGCC 
CACTCCCGGT CCCTGGCCGA TCTGGCCCCG CTCTTCGACG CGCTGGAAGA ACAGGTCGTG 
CTGATGAAGC TCATGAGCAA CCTGAGCGAG GAGACGAATG CATCCGGCGT GGGCGTGGCC 
ATCGGCTCCG AAATGCACAC CCCCGGACTA CTGCATGCTT CCGTGGTCAG CAGTGGCTAT 
GGGCGCAGCG GAGCGGCGGG CGAACCGGCG GGGAACGATC CCGTAGGCGA ACCCGAAACC 
GAATCCGAGA CGGAGAGCCA GACGAACGAC ACGGAACCCA TCGCCTTCGT TGGCTCCATA 
GGGCCGACCC ACATGGACTA CGCGGCCACT ATGGCCGCCG TCAGGGCCGT AGCCAGATAT 
TTGACCGCCT TCCTCTCCGA GGGCCGGACT CAAGACTGA 

 

Protein sequence

MTQSRRMLVL RAVVEDYIRS QEPVGSTSLT RDHDLGVSSA TIRNDMAALE DEGYLIQPHT 
SAGRVPTEKG YRYFVDRLAT VVPLSEAQRR GINSFLSGSV SLKDALQRSA RLLSEITGQV 
AVVASPSLAK ATLRHVEMVP VAMTTLLAVV ITDTGRVAQH GLTIASMPAV DEINRLSNTV 
NEQCDGLSLS KSAETVRSIA ASAGYESVRG VADALADAFE SMALDERANE LYMSGTSHLA 
HSRSLADLAP LFDALEEQVV LMKLMSNLSE ETNASGVGVA IGSEMHTPGL LHASVVSSGY 
GRSGAAGEPA GNDPVGEPET ESETESQTND TEPIAFVGSI GPTHMDYAAT MAAVRAVARY 
LTAFLSEGRT QD