Gene BLD_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_0002 
SymbolgroEL 
ID6363689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp526 
End bp2151 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content64% 
IMG OID642679141 
Productchaperonin GroEL 
Protein accessionYP_001953946 
Protein GI189438865 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02348] chaperonin GroL 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0309726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGA TCATCTCTTA TGATGAGGAA GCCCGTCAGG GCATGCTGGA GGGCCTTGAC 
AAGCTCGCCA ACACCGTCAA GGTCACTCTG GGCCCGAAGG GCCGCAACGT CGTGCTCGAC
AAGACCTACG GCGCTCCGAC CATCACCAAC GATGGCGTGT CCATCGCCAA GGAAATCGAC
CTTGAAGACC CGTACGAGCG CATCGGCGCC GAGCTGGTCA AGGAAGTCGC CAAGAAGACC
GACGACGTCG CCGGTGACGG CACCACCACT GCAACCGTGC TTGCTCAGTC CCTGGTTCAC
GAGGGTCTGA AGAACGTGGT CGCCGGCTCC AACCCGATCG CCCTGCGTCG CGGCATCGAG
AAGGCCACCG AGGTCATCGT CAAGGAACTC GTCGCTGCCG CCAAGGACGT CGAGACCAAG
GACCAGATCG CTGCTACCGC CACCATCTCC GCCGCTGACC CTGAGGTCGG CGAGAAGATC
GCTGAGGCTC TGGACAAGGT CGGCCAGGAC GGCGTTGTGA CCGTTGAAGA CAACAACCGC
TTCGGCCTGG ACCTCGACTT CACCGAGGGC ATGCGTTTTG ACAAGGGCTA CATCGCCCCG
TACTTCGTCA CCAACGCTGA CGACCAGACC GCAGTGCTCG AAGATCCGTA CATTCTGCTG
ACCTCCGGCA AGGTCTCATC CCAGCAGGAC ATCGTGCACG TGGCCGAGCT GGTCATGAAG
ACCGGCAAGC CGCTGCTGAT CATCGCTGAG GACGTCGACG GCGAAGCACT GCCGACCTTG
ATCCTGAACA ACATCCGTGG CACCTTCAAG TCCTGCGCCG TCAAGGCCCC GGGCTTTGGC
GACCGTCGCA AGGCCATGCT GCAGGATATG GCCATCCTGA CCGGTGCTCA GGTTGTCTCC
GACGAACTGG GCCTGAAGCT CGAGTCCGTC GACACCTCCG TGCTCGGCCA CGCCAAGAAG
GTCATCGTCT CCAAGGACGA GACCACCATC GTTCAGGGCG CTGGCTCCAA GGAAGACATC
GACGCTCGCG TGGCCCAGAT CCGCGCTGAG ATCGAGAACA CCGACTCCGA TTACGACCGT
GAGAAGCTGC AGGAGCGTCT GGCCAAGCTG GCTGGCGGCG TGGCTGTCAT CAAGGTCGGC
GCTGCCACCG AGGTCGAGGC CAAGGAGCGC AAGCACCGCA TCGAAGATGC CGTGCGTAAC
GCCAAGGCCG CCATCGAGGA AGGCCTGCTG CCTGGCGGTG GCGTGGCCCT CGTTCAGGCT
GCTGCCAAGG CCGAGAAGAC CGAGGCCGTC ACCTCCCTGA CCGGCGAAGA GGCTACCGGT
GCCGCCATCG TGTTCCGCGC CATCGAGGCC CCGATCAAGC AGATCGCCGA GAACGCCGGC
GTGTCCGGTG ACGTGGTCAT CAACACCGTC CGCTCCCTGC CTGATGGCGA AGGCTTCAAC
GCCGCCACCG ACACCTACGA AGACCTGCTG GCCGCCGGTG TGACCGACCC GGTCAAGGTG
ACCCGCTCCG CTCTGCAGAA CGCCGCCTCC ATCGCTGGTC TGTTCCTGAC CACCGAGGCC
GTCGTTGCCA ACAAGCCGGA GCCGAAGTCT GCTGCCCCGG CCGCCGGTGC CGACATGGGC
TACTGA
 
Protein sequence
MAKIISYDEE ARQGMLEGLD KLANTVKVTL GPKGRNVVLD KTYGAPTITN DGVSIAKEID 
LEDPYERIGA ELVKEVAKKT DDVAGDGTTT ATVLAQSLVH EGLKNVVAGS NPIALRRGIE
KATEVIVKEL VAAAKDVETK DQIAATATIS AADPEVGEKI AEALDKVGQD GVVTVEDNNR
FGLDLDFTEG MRFDKGYIAP YFVTNADDQT AVLEDPYILL TSGKVSSQQD IVHVAELVMK
TGKPLLIIAE DVDGEALPTL ILNNIRGTFK SCAVKAPGFG DRRKAMLQDM AILTGAQVVS
DELGLKLESV DTSVLGHAKK VIVSKDETTI VQGAGSKEDI DARVAQIRAE IENTDSDYDR
EKLQERLAKL AGGVAVIKVG AATEVEAKER KHRIEDAVRN AKAAIEEGLL PGGGVALVQA
AAKAEKTEAV TSLTGEEATG AAIVFRAIEA PIKQIAENAG VSGDVVINTV RSLPDGEGFN
AATDTYEDLL AAGVTDPVKV TRSALQNAAS IAGLFLTTEA VVANKPEPKS AAPAAGADMG
Y