Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0002 |
Symbol | groEL |
ID | 6363689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 526 |
End bp | 2151 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642679141 |
Product | chaperonin GroEL |
Protein accession | YP_001953946 |
Protein GI | 189438865 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0309726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGA TCATCTCTTA TGATGAGGAA GCCCGTCAGG GCATGCTGGA GGGCCTTGAC AAGCTCGCCA ACACCGTCAA GGTCACTCTG GGCCCGAAGG GCCGCAACGT CGTGCTCGAC AAGACCTACG GCGCTCCGAC CATCACCAAC GATGGCGTGT CCATCGCCAA GGAAATCGAC CTTGAAGACC CGTACGAGCG CATCGGCGCC GAGCTGGTCA AGGAAGTCGC CAAGAAGACC GACGACGTCG CCGGTGACGG CACCACCACT GCAACCGTGC TTGCTCAGTC CCTGGTTCAC GAGGGTCTGA AGAACGTGGT CGCCGGCTCC AACCCGATCG CCCTGCGTCG CGGCATCGAG AAGGCCACCG AGGTCATCGT CAAGGAACTC GTCGCTGCCG CCAAGGACGT CGAGACCAAG GACCAGATCG CTGCTACCGC CACCATCTCC GCCGCTGACC CTGAGGTCGG CGAGAAGATC GCTGAGGCTC TGGACAAGGT CGGCCAGGAC GGCGTTGTGA CCGTTGAAGA CAACAACCGC TTCGGCCTGG ACCTCGACTT CACCGAGGGC ATGCGTTTTG ACAAGGGCTA CATCGCCCCG TACTTCGTCA CCAACGCTGA CGACCAGACC GCAGTGCTCG AAGATCCGTA CATTCTGCTG ACCTCCGGCA AGGTCTCATC CCAGCAGGAC ATCGTGCACG TGGCCGAGCT GGTCATGAAG ACCGGCAAGC CGCTGCTGAT CATCGCTGAG GACGTCGACG GCGAAGCACT GCCGACCTTG ATCCTGAACA ACATCCGTGG CACCTTCAAG TCCTGCGCCG TCAAGGCCCC GGGCTTTGGC GACCGTCGCA AGGCCATGCT GCAGGATATG GCCATCCTGA CCGGTGCTCA GGTTGTCTCC GACGAACTGG GCCTGAAGCT CGAGTCCGTC GACACCTCCG TGCTCGGCCA CGCCAAGAAG GTCATCGTCT CCAAGGACGA GACCACCATC GTTCAGGGCG CTGGCTCCAA GGAAGACATC GACGCTCGCG TGGCCCAGAT CCGCGCTGAG ATCGAGAACA CCGACTCCGA TTACGACCGT GAGAAGCTGC AGGAGCGTCT GGCCAAGCTG GCTGGCGGCG TGGCTGTCAT CAAGGTCGGC GCTGCCACCG AGGTCGAGGC CAAGGAGCGC AAGCACCGCA TCGAAGATGC CGTGCGTAAC GCCAAGGCCG CCATCGAGGA AGGCCTGCTG CCTGGCGGTG GCGTGGCCCT CGTTCAGGCT GCTGCCAAGG CCGAGAAGAC CGAGGCCGTC ACCTCCCTGA CCGGCGAAGA GGCTACCGGT GCCGCCATCG TGTTCCGCGC CATCGAGGCC CCGATCAAGC AGATCGCCGA GAACGCCGGC GTGTCCGGTG ACGTGGTCAT CAACACCGTC CGCTCCCTGC CTGATGGCGA AGGCTTCAAC GCCGCCACCG ACACCTACGA AGACCTGCTG GCCGCCGGTG TGACCGACCC GGTCAAGGTG ACCCGCTCCG CTCTGCAGAA CGCCGCCTCC ATCGCTGGTC TGTTCCTGAC CACCGAGGCC GTCGTTGCCA ACAAGCCGGA GCCGAAGTCT GCTGCCCCGG CCGCCGGTGC CGACATGGGC TACTGA
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Protein sequence | MAKIISYDEE ARQGMLEGLD KLANTVKVTL GPKGRNVVLD KTYGAPTITN DGVSIAKEID LEDPYERIGA ELVKEVAKKT DDVAGDGTTT ATVLAQSLVH EGLKNVVAGS NPIALRRGIE KATEVIVKEL VAAAKDVETK DQIAATATIS AADPEVGEKI AEALDKVGQD GVVTVEDNNR FGLDLDFTEG MRFDKGYIAP YFVTNADDQT AVLEDPYILL TSGKVSSQQD IVHVAELVMK TGKPLLIIAE DVDGEALPTL ILNNIRGTFK SCAVKAPGFG DRRKAMLQDM AILTGAQVVS DELGLKLESV DTSVLGHAKK VIVSKDETTI VQGAGSKEDI DARVAQIRAE IENTDSDYDR EKLQERLAKL AGGVAVIKVG AATEVEAKER KHRIEDAVRN AKAAIEEGLL PGGGVALVQA AAKAEKTEAV TSLTGEEATG AAIVFRAIEA PIKQIAENAG VSGDVVINTV RSLPDGEGFN AATDTYEDLL AAGVTDPVKV TRSALQNAAS IAGLFLTTEA VVANKPEPKS AAPAAGADMG Y
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