| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0052 |
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| Symbol | aapJ |
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| ID | 5148653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009475 |
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| Strand | + |
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| Start bp | 34100 |
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| End bp | 35119 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640538979 |
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| Product | general L-amino acid-binding periplasmic protein |
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| Protein accession | YP_001220412 |
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| Protein GI | 148240911 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGGT TGACAATGCT CCTCGGCGCG GCGCTCACCG CCGCCGGTCT GACCGCGAGC
GCCGGTGCGC AGAGCGTCGT GAACAAGATC AAGCAGCGCG GCTATGTCAG CTGCGGCGCA
AGCCAGGGCG TGCCGGGTCT CTCCCGCCCC GACGAGAACG GTTATTATCG GGGCTTCGAT
TCCGACATGT GCCGTACCTT CGCGGCGGCC ATCCTCGGCG ACAAGGACAA GATCCGCTTC
GTGCCGCTCA ATGCCGGCCA GCGCTTCCCG GCGCTGCAGA CCGGCGAGAT CGATGTCCTG
TCGCGGACCT CAACCATCAC CCTCTCACGC GACACGGTGG TGCGCTTCGT CTGGATCACG
CTCTACGACA CCGACGGCCT GCTCGTGCGA AAGGCCGACA AGATCACCGA TCCCAAGCAG
CTCGCCGGAA AGACGGTCTG CCTGCAGGGC GGCGGCAGTT TGACCGAGAG GTCGATCGAG
GAGACCGAGG AAGAATACGG AATCACGATG AAGAAGGTCT ACTTCGACTC GACGATTCAG
GCGCGCGATG CCTTCTTCGG CGGCCGCTGC GACACCTATG TGACCGATGG CACGGCCGCC
GCCGGCCAGC GGGCCTCGGT GGCAAAGAAC CCGGACGACT ACGACATCAT CAAGGTGGGC
CATGCGGCCG AGCCGAACGG CGTCGCGGTC GCGCGCGGGG ACGATCAGCT CTTCGACATC
ACGCGCTGGA CGATCAATGC CCTCCTCTGG GCCGAGCTCC ACGGCATTAC CGCCAGGAAC
ATCGACGAGA AGCTGAAATC CGGATCGATC GAGATCAAGC GGGTTTTGGG GCAGGAACCG
GGCTTCGGCA AGCCGCTCGG GCTCGACGAC AAATGGGTCT ACAACGTCGT CAAGCAGATG
GGGAACTACG CCGAGATCTG GGACAACAAT CTCGGGAAGA GCAGCCCCCT CAAGATCGAT
CGCGGCCTGA ACGCTCTCTG GAAGGATGGC GGCCTGAACT ACCCCTACCC CTGGGACTAG
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| Protein sequence | MTRLTMLLGA ALTAAGLTAS AGAQSVVNKI KQRGYVSCGA SQGVPGLSRP DENGYYRGFD
SDMCRTFAAA ILGDKDKIRF VPLNAGQRFP ALQTGEIDVL SRTSTITLSR DTVVRFVWIT
LYDTDGLLVR KADKITDPKQ LAGKTVCLQG GGSLTERSIE ETEEEYGITM KKVYFDSTIQ
ARDAFFGGRC DTYVTDGTAA AGQRASVAKN PDDYDIIKVG HAAEPNGVAV ARGDDQLFDI
TRWTINALLW AELHGITARN IDEKLKSGSI EIKRVLGQEP GFGKPLGLDD KWVYNVVKQM
GNYAEIWDNN LGKSSPLKID RGLNALWKDG GLNYPYPWD
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